Escherichia coli 1613 |
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Putative Escherichia coli 1613 RM systems
Ref: Kim,J.-S. et al. unpublished
REBASE ref # 35537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,490,388 bp | CP082835 |
| plasmid unnamed1: | 92,294 bp | CP082836 |
REBASE acronym: Ecos1613
Org_num: 62898
All begin K8O78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5200 | M48 family metallopeptidase | |||
| 5205 | R | EcoZ1834ORF18390P (100% identity) | CCAYNNNNNGTTY | Ecos1613ORF5225P |
| 5210 | macro domain-containing protein | |||
| 5215 | DUF4433 domain-containing protein | |||
| 5220 | S | S.EcoZYB62ORF14100P (100% identity) | CCAYNNNNNGTTY | S.Ecos1613ORF5225P |
| 5225 | M | M.EcoZYB62ORF14100P (100% identity) | CCAYNNNNNGTTY | M.Ecos1613ORF5225P |
| 5230 | 58 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8565 | TrmB family transcriptional regulator | |||
| 8570 | M | M.EcosPA8ORF27255P (100% identity) | M.Ecos1613ORF8570P | |
| 8585 | DUF1737 domain-containing protein | |||
| 12910 | drug/metabolite exporter YedA | |||
| 12915 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Ecos1613DcmP |
| 12920 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Ecos1613DcmP |
| 12925 | phosphohydrolase | |||
| 20870 | DNA-binding transcriptional regulator Fis | |||
| 20875 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Ecos1613ORF20875P |
| 20880 | DUF2556 family protein | |||
| 21390 | ribulose-phosphate 3-epimerase | |||
| 21395 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecos1613DamP |
| 21400 | cell division protein DamX | |||
| 25550 | 65 aa hypothetical protein | |||
| ??? | M | M.EcoTWORF5132P (100% identity) | M.Ecos1613ORF25555P | |
| 25560 | Eae protein | |||
| 26790 | transposase | |||
| 26795 | R | Ecos15739ORF19095P (100% identity) | Ecos1613ORF26795P | |
| 26800 | N-acetylneuraminic acid mutarotase | |||
| 26830 | DEAD/DEAH box helicase | |||
| 26835 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Ecos1613ORF26835P |
| plasmid unnamed1 | ||||
| 27460 | 73 aa hypothetical protein | |||
| 27465 | M | M.EcosPA8ORF27775P (100% identity) | M.Ecos1613ORF27465P | |
| 27470 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27035 | DUF1127 domain-containing protein | |||
| 27040 | R | EcoZ910GmrSP (100% identity) | Ecos1613GmrSP | |
| 27045 | R | EcosPA8GmrSDP (55% identity) | Ecos1613GmrDP | |
| 27050 | endoribonuclease SymE | |||