Lacticaseibacillus paracasei NG-LCU-ST2 |
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Putative Lacticaseibacillus paracasei NG-LCU-ST2 RM systems
Ref: Oluboyede,O.A. et al. unpublished
REBASE ref # 35482
Complete sequence: 3,116,663 bp
GenBank #: CP107221
REBASE acronym: LpaST2
Org_num: 62731
All begin OGL96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3175 | DUF262 domain-containing HNH endonuclease family | |||
| 3180 | S | S2.LpaOF10ORF5340P (100% identity) | S1.LpaST2ORF3180P | |
| 3185 | site-specific integrase | |||
| 3190 | S | S2.LpaXI3ORFBP (55% identity) | S2.LpaST2ORF3180P | |
| 3195 | IS30 family transposase | |||
| 6890 | IS30 family transposase | |||
| 6895 | S | S2.LpaXI3ORFBP (44% identity) | S2.LpaST2ORF6910P | |
| 6900 | site-specific integrase | |||
| 6905 | S | S1.LpaXI3ORFBP (100% identity) | S1.LpaST2ORF6910P | |
| 6910 | M | M.LpaXI3ORFBP (100% identity) | M.LpaST2ORF6910P | |
| 6915 | R | LpaXI3ORFBP (100% identity) | LpaST2ORF6910P | |
| 6920 | 188 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2665 | 69 aa hypothetical protein | |||
| 2670 | M | M.Lca5bORF11990P (89% identity) | M.LpaST2ORF2670P | |
| 2675 | 143 aa hypothetical protein | |||