Escherichia coli RSHH22 |
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Putative Escherichia coli RSHH22 RM systems
Ref: Romero,R. et al. Microbiome 10 (1), 158 (2022)
REBASE ref # 35472
| Sequence length: | GenBank #: | |
| Chromosome: | 5,094,340 bp | CP096902 |
| plasmid pEC_RSHH22_1: | 161,535 bp | CP096903 |
REBASE acronym: EcoHH22
Org_num: 62716
All begin M1Y13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19240 | GTPase family protein | |||
| 19245 | M | M.EcoPM8ORF2015P (100% identity) | M.EcoHH22ORF19245P | |
| 19250 | S | S.EcoSMBLORF18395P (100% identity) | S.EcoHH22ORF19245P | |
| 19255 | R | EcoSMBLORF18395P (100% identity) | EcoHH22ORF19245P | |
| 19260 | IS66 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoHH22DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoHH22ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 9695 | phosphohydrolase | |||
| 9700 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoHH22DcmP |
| 9705 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoHH22DcmP |
| 9710 | drug/metabolite exporter YedA | |||
| 13965 | DUF1804 family protein | |||
| 13970 | M | M.EcoPM8ORF7680P (100% identity) | M.EcoHH22ORF13970P | |
| 13975 | phage terminase large subunit | |||
| 21165 | HNH endonuclease | |||
| 21170 | R | Ecostr10ORF18645P (100% identity) | EcoHH22ORF21170P | |
| 21175 | 332 aa hypothetical protein | |||
| plasmid pEC_RSHH22_1 | ||||
| 25125 | group II intron reverse transcriptase/maturase | |||
| 25130 | M | M.SflP099ORF24190P (88% identity) | M.EcoHH22ORF25130P | |
| 25135 | 73 aa hypothetical protein | |||