Escherichia coli MY504 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MY504 RM systems
Ref: Yasugi,M. et al. unpublished
REBASE ref # 35445
| Sequence length: | GenBank #: | |
| Chromosome: | 4,808,031 bp | AP026902 |
| plasmid pMY504-1: | 291,417 bp | AP026903 |
| plasmid pMY504-2: | 237,635 bp | AP026904 |
| plasmid pMY504-3: | 82,743 bp | AP026905 |
REBASE acronym: EcoMY504
Org_num: 62521
All begin MY017_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 36750 | 102 aa hypothetical protein | |||
| 36760 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | EcoMY504ORF36770P |
| 36770 | M | M.SflTORF4636P (98% identity) | AAGNNNNNNNRTDCC | M.EcoMY504ORF36770P |
| 36780 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.EcoMY504ORF36770P |
| 36790 | toxic peptide regulated by antisense sRNA symR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3390 | cell division protein DamX | |||
| 3400 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMY504DamP |
| 3410 | D-ribulose-5-phosphate 3-epimerase | |||
| 4520 | transcriptional regulator | |||
| 4530 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoMY504ORF4530P |
| 4540 | global DNA-binding transcriptional dual | |||
| 12580 | 64 aa hypothetical protein | |||
| 12590 | M | M.Eho218ORF16395P (100% identity) | GATC | M.EcoMY504ORF12590P |
| 12600 | 99 aa hypothetical protein | |||
| 18600 | HD superfamily phosphohydrolase | |||
| 18610 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoMY504DcmP |
| 18620 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoMY504DcmP |
| 18630 | amino acid exporter for phenylalanine | |||
| plasmid pMY504-1 | ||||
| 45720 | endonuclease | |||
| 45730 | M | M.Ssp15303DcmP (88% identity) | M.EcoMY504Dcm2P | |
| 45740 | transposase | |||
| 46000 | IS1 family transposase InsB | |||
| 46010 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoMY504ORF46010P |
| 46020 | R | YpsR1ORFAP (99% identity) | CCWGG | EcoMY504ORF46010P |
| 46030 | 106 aa hypothetical protein | |||
| 47110 | 85 aa hypothetical protein | |||
| 47120 | M | M.Ssp15303ORFEP (84% identity) | M.EcoMY504ORF47120P | |
| 47130 | DNA-binding protein | |||
| 47390 | 202 aa hypothetical protein | |||
| 47400 | M | M.Ssp15303ORFDP (100% identity) | M.EcoMY504ORF47400P | |
| 47410 | 106 aa hypothetical protein | |||
| plasmid pMY504-2 | ||||
| 50530 | 65 aa hypothetical protein | |||
| 50540 | M | M.SflC32ORFBP (100% identity) | M.EcoMY504ORF50540P | |
| 50550 | TciA/TerB-like protein | |||
| plasmid pMY504-3 | ||||
| 51800 | 308 aa hypothetical protein | |||
| 51810 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoMY504ORF51810P |
| 51820 | 73 aa hypothetical protein | |||