Escherichia coli EC5931 |
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Putative Escherichia coli EC5931 RM systems
Ref: Lin,J. et al. unpublished
REBASE ref # 35373
| Sequence length: | GenBank #: | |
| Chromosome: | 4,931,634 bp | CP104592 |
| plasmid pEC5931-2: | 103,138 bp | CP104594 |
REBASE acronym: Eco5931
Org_num: 62242
All begin N5B54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1195 | helix-turn-helix domain-containing protein | |||
| 1200 | R | Sma1978ORFBP (100% identity) | Eco5931ORF1235P | |
| 1205 | histidinol-phosphatase | |||
| 1210 | DNA binding domain-containing protein | |||
| 1215 | S | S.Sma1978ORFBP (55% identity) | S2.Eco5931ORF1235P | |
| 1220 | IS1 family transposase | |||
| 1225 | S | S.Sma1978ORFBP (43% identity) | S1.Eco5931ORF1235P | |
| 1230 | AAA family ATPase | |||
| 1235 | M | M.Sma1978ORFBP (100% identity) | M.Eco5931ORF1235P | |
| 1240 | TniQ family protein | |||
| 4370 | transposase | |||
| 4375 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco5931ORF4380P |
| 4380 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco5931ORF4380P |
| 4385 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco5931ORF4380P |
| 4390 | AAA family ATPase | |||
| 18680 | type IV toxin-antitoxin system AbiEi family | |||
| 18685 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco5931ORF18690P |
| 18690 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco5931ORF18690P |
| 18695 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco5931ORF18690P |
| 18700 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco5931DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 family protein | |||
| 2385 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco5931ORF2385P |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 20625 | McrC family protein | |||
| 20630 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco5931ORF20635P |
| 20635 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco5931ORF20635P |
| 20640 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco5931ORF20635P |
| 20645 | helix-turn-helix domain-containing protein | |||
| 20910 | 174 aa hypothetical protein | |||
| 20915 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco5931ORF20915P |
| 20920 | ATP-binding protein | |||
| 20925 | response regulator receiver domain | |||
| 20930 | R | Ecos19ORF20635P (100% identity) | Eco5931ORF20930P | |
| 20935 | 97 aa hypothetical protein | |||
| plasmid pEC5931-2 | ||||
| 25535 | 101 aa hypothetical protein | |||
| 25540 | M | M.Sso11ORF329P (100% identity) | M.Eco5931ORF25540P | |
| 25545 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20615 | glycosyltransferase | |||
| 20620 | R | EcosS3McrBP (100% identity) | Eco5931McrBP | |
| 20625 | R | EcosS9McrCP (100% identity) | Eco5931McrCP | |
| 20630 | Alw26I/Eco31I/Esp3I family type II restriction | |||