Escherichia coli JNQH498 |
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Putative Escherichia coli JNQH498 RM systems
Ref: Hao,M. unpublished
REBASE ref # 32044
| Sequence length: | GenBank #: | |
| Chromosome: | 4,751,955 bp | CP104384 |
| plasmid pJNQH498-1: | 263,021 bp | CP104385 |
REBASE acronym: Eco498
Org_num: 62159
All begin KIG00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8980 | IS3 family transposase | |||
| 8985 | R | EhoEh60ORF13695P (97% identity) | Eco498ORF8985P | |
| 8990 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco498DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco498ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 8710 | phosphohydrolase | |||
| 8715 | M | M.Ecostr9DcmP (100% identity) | CCWGG | M.Eco498DcmP |
| 8720 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco498DcmP |
| 8725 | drug/metabolite exporter YedA | |||
| 9235 | 73 aa hypothetical protein | |||
| 9240 | M | M.KpnP3ORF24145P (100% identity) | GATC | M.Eco498ORF9240P |
| 9245 | YqaJ viral recombinase family protein | |||
| 11080 | DUF977 family protein | |||
| 11085 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco498ORF11085P | |
| 11090 | IS3 family transposase | |||
| 15000 | replication endonuclease | |||
| 15005 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco498ORF15005P |
| 15010 | TraR/DksA family transcriptional regulator | |||
| 18320 | NinE family protein | |||
| 18325 | M | M.EcoH497ORF18315P (100% identity) | GATC | M.Eco498ORF18325P |
| 18330 | recombination protein NinB | |||
| plasmid pJNQH498-1 | ||||
| 23910 | IS6-like element IS26 family transposase | |||
| 23915 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco498ORF23920P |
| 23920 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco498ORF23920P |
| 23925 | IS1 family transposase | |||
| 24055 | 55 aa hypothetical protein | |||
| 24060 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco498ORF24060P |
| 24065 | thermonuclease family protein | |||
| 24470 | 48 aa hypothetical protein | |||
| 24475 | M | M.YpsF1ORFBP (100% identity) | M.Eco498ORF24475P | |
| 24480 | 202 aa hypothetical protein | |||
| 24590 | DNA-binding protein | |||
| 24595 | M | M.YpsF1ORFDP (95% identity) | M.Eco498ORF24595P | |
| 24600 | 284 aa hypothetical protein | |||