Escherichia coli E1 |
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Putative Escherichia coli E1 RM systems
Ref: Feng,A. et al. unpublished
REBASE ref # 35294
| Sequence length: | GenBank #: | |
| Chromosome: | 4,910,007 bp | CP104503 |
| plasmid p1: | 390,109 bp | CP104504 |
| plasmid p2: | 50,720 bp | CP104505 |
REBASE acronym: EcoE1
Org_num: 61955
All begin N5O81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18610 | endoribonuclease SymE | |||
| 18615 | R | EcosA4IIP (100% identity) | GATANNNNNNTCC | EcoE1ORF18625P |
| 18620 | S | S.EcosA4II (100% identity) | GATANNNNNNTCC | S.EcoE1ORF18625P |
| 18625 | M | M.EcosA4II (100% identity) | GATANNNNNNTCC | M.EcoE1ORF18625P |
| 18630 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5335 | drug/metabolite exporter YedA | |||
| 5340 | V | V.EcosA4DcmP (100% identity) | V.EcoE1DcmP | |
| 5345 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.EcoE1DcmP |
| 5350 | phosphohydrolase | |||
| 12670 | DNA-binding transcriptional regulator Fis | |||
| 12675 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoE1ORF12675P |
| 12680 | DUF2556 family protein | |||
| 13270 | ribulose-phosphate 3-epimerase | |||
| 13275 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE1DamP |
| 13280 | cell division protein DamX | |||
| 16940 | 28 aa hypothetical protein | |||
| 16945 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoE1ORF16945P |
| 16950 | LexA family transcriptional regulator | |||
| 16980 | 67 aa hypothetical protein | |||
| 16985 | M | M.Sso63633ORF22290P (100% identity) | M.EcoE1ORF16985P | |
| 16990 | class II holin family protein | |||
| 18370 | McrC family protein | |||
| 18375 | R | EcosA4ORF22115P (100% identity) | EcoE1ORF18375P | |
| 18380 | HNH endonuclease | |||
| 18825 | PerC family transcriptional regulator | |||
| 18830 | M | M.EcoSC101ORFHP (99% identity) | GATC | M.EcoE1ORF18830P |
| 18835 | LexA family transcriptional regulator | |||
| plasmid p1 | ||||
| 24145 | 55 aa hypothetical protein | |||
| 24150 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoE1ORF24150P |
| 24155 | thermonuclease family protein | |||
| 24565 | 48 aa hypothetical protein | |||
| 24570 | M | M.YpsF1ORFBP (100% identity) | M.EcoE1ORF24570P | |
| 24575 | 202 aa hypothetical protein | |||
| 24705 | DNA-binding protein | |||
| 24710 | M | M.YpsF1ORFDP (95% identity) | M.EcoE1ORF24710P | |
| 24715 | 284 aa hypothetical protein | |||
| plasmid p2 | ||||
| 26120 | phage holin family protein | |||
| 26125 | M | M.Ecop367ORF26210P (100% identity) | M.EcoE1ORF26125P | |
| 26130 | 75 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18360 | DUF4942 domain-containing protein | |||
| 18365 | R | EcosA4McrBP (100% identity) | EcoE1McrBP | |
| 18370 | R | EcosA4McrCP (100% identity) | EcoE1McrCP | |
| 18375 | HNH endonuclease | |||
| 18625 | type I restriction-modification system subunit | |||
| 18630 | R | EcosA4MrrP (99% identity) | EcoE1MrrP | |
| 18635 | BrnT family toxin | |||