Escherichia coli E5 |
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Putative Escherichia coli E5 RM systems
Ref: Feng,A. et al. unpublished
REBASE ref # 35294
Complete sequence: 4,960,534 bp
GenBank #: CP104521
REBASE acronym: EcoE5
Org_num: 61960
All begin N5O78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2055 | AAA family ATPase | |||
| 2060 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoE5ORF2065P |
| 2065 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoE5ORF2065P |
| 2070 | R | EcoPSUO78ORF23890P (100% identity) | TGANNNNNNCTTC | EcoE5ORF2065P |
| 2075 | IS3-like element ISEc52 family transposase | |||
| 2485 | endoribonuclease SymE | |||
| 2490 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | EcoE5ORF2500P |
| 2495 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.EcoE5ORF2500P |
| 2500 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.EcoE5ORF2500P |
| 2505 | restriction endonuclease | |||
| 18230 | transposase domain-containing protein | |||
| 18235 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoE5ORF18240P |
| 18240 | M | M.SflN101ORF19075P (94% identity) | GAACNNNNNTGC | M.EcoE5ORF18240P |
| 18245 | NAD(P)H-dependent oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | 318 aa hypothetical protein | |||
| 25 | M | M.Ecos641ORF25P (100% identity) | GGCC | M.EcoE5ORF25P |
| 30 | phage portal protein | |||
| 2305 | peptidase | |||
| 2310 | R | SflFF17ORF19275P (100% identity) | EcoE5ORF2310P | |
| 2315 | HNH endonuclease | |||
| 13115 | drug/metabolite exporter YedA | |||
| 13120 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoE5DcmP |
| 13125 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoE5DcmP |
| 13130 | phosphohydrolase | |||
| 20340 | DNA-binding transcriptional regulator Fis | |||
| 20345 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoE5ORF20345P |
| 20350 | DUF2556 family protein | |||
| 20940 | ribulose-phosphate 3-epimerase | |||
| 20945 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE5DamP |
| 20950 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2500 | type I restriction-modification system subunit | |||
| 2505 | R | EfeE4C07MrrP (100% identity) | EcoE5MrrP | |
| 2510 | BrnT family toxin | |||