Limosilactobacillus reuteri AM_LB1 |
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Putative Limosilactobacillus reuteri AM_LB1 RM systems
Ref: den Bakker,H.C. and Mann,A. unpublished
REBASE ref # 35298
Complete sequence: 2,319,385 bp
GenBank #: CP104438
REBASE acronym: LreLB1
Org_num: 61988
All begin N4560_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5465 | acetoin reductase | |||
| 5470 | R | LreQS01ORF3850P (99% identity) | LreLB1ORF5475P | |
| 5475 | M | M.LreQS01ORF3850P (100% identity) | M.LreLB1ORF5475P | |
| 5480 | S | S2.LreQS01ORF3850P (62% identity) | S1.LreLB1ORF5475P | |
| 5485 | site-specific integrase | |||
| 5490 | S | S3.LreQS01ORF3850P (63% identity) | S2.LreLB1ORF5475P | |
| 5495 | HigA family addiction module antitoxin | |||
| 5500 | type II toxin-antitoxin system RelE/ParE family | |||
| 5505 | S | S1.LreQS01ORF3850P (95% identity) | S3.LreLB1ORF5475P | |
| 5510 | restriction endonuclease | |||
| 9895 | 132 aa hypothetical protein | |||
| 9900 | R | LvaGSH01ORF845P (99% identity) | LreLB1ORF9925P | |
| 9905 | S | S1.Lre121ORF3400P (97% identity) | S3.LreLB1ORF9925P | |
| 9910 | S | S3.LvaGSH01ORF845P (100% identity) | S2.LreLB1ORF9925P | |
| 9915 | tyrosine-type recombinase/integrase | |||
| 9920 | S | S2.Lre417ORF6160P (56% identity) | S1.LreLB1ORF9925P | |
| 9925 | M | M.LvaGSH01ORF845P (99% identity) | M.LreLB1ORF9925P | |
| 9930 | glutamine-hydrolyzing GMP synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1110 | nucleoside-diphosphate kinase | |||
| 1115 | M | M.LrerORFBP (100% identity) | TTTAAA | M.LreLB1ORF1115P |
| 1120 | tryptophan--tRNA ligase | |||
| 5005 | collagen-like protein | |||
| 5010 | RM | LsaM11ORF3555P (71% identity) | LreLB1ORF5010P | |
| 5015 | 163 aa hypothetical protein | |||
| 8610 | DUF262 domain-containing HNH endonuclease family | |||
| 8615 | RM | Lre384ORF635BP (99% identity) | LreLB1ORF8620P | |
| ??? | M | M1.Lke1207ORF3615P (40% identity) | M.LreLB1ORF8620P | |
| 8630 | C | C.Lre384ORF635P (100% identity) | C.LreLB1ORF8620P | |
| 8635 | DEAD/DEAH box helicase | |||
| 8705 | P27 family phage terminase small subunit | |||
| 8710 | M | M.PacBCC1ORF7745P (100% identity) | M.LreLB1ORF8710P | |
| 8715 | 206 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 955 | phosphatase PAP2 family protein | |||
| 960 | R | LreL8ORF5100P (100% identity) | LreLB1ORF960P | |
| 965 | 92 aa hypothetical protein | |||
| 5505 | restriction endonuclease subunit S | |||
| 5510 | R | LreL11MrrP (100% identity) | LreLB1MrrP | |
| 5515 | restriction endonuclease | |||
| 5510 | restriction endonuclease | |||
| 5515 | R | LreQS01Mrr2P (100% identity) | LreLB1Mrr2P | |
| 5520 | 552 aa hypothetical protein | |||
| 8590 | 136 aa hypothetical protein | |||
| 8595 | R | LreL8ORF8775P (99% identity) | LreLB1ORF8595P | |
| 8600 | (deoxy)nucleoside triphosphate | |||