Escherichia coli hubt-sl |
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Putative Escherichia coli hubt-sl RM systems
Ref: Wang,J.-H. unpublished
REBASE ref # 35195
Complete sequence: 4,859,767 bp
GenBank #: CP104206
REBASE acronym: Ecohubt
Org_num: 61576
All begin N1H45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19930 | 128 aa hypothetical protein | |||
| 19935 | M | M.EcoWORF4661P (100% identity) | TGANNNNNNTCCA | M.EcohubtORF19935P |
| 19940 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcohubtORF19935P |
| 19945 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1860 | cell division protein DamX | |||
| 1865 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcohubtDamP |
| 1870 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcohubtORF2420P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 7790 | TraR/DksA family transcriptional regulator | |||
| 7795 | M | M.EcoWORF915P (100% identity) | GATC | M.EcohubtORF7795P |
| 7800 | replication endonuclease | |||
| 11575 | 95 aa hypothetical protein | |||
| 11580 | M | M.SsoSE61ORF20220P (100% identity) | M.EcohubtORF11580P | |
| 11585 | DUF977 family protein | |||
| 13625 | drug/metabolite exporter YedA | |||
| 13630 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcohubtDcmP |
| 13635 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcohubtDcmP |
| 13640 | phosphohydrolase | |||
| 19910 | HNH endonuclease | |||
| 19915 | R | EcoSL112ORF22900P (100% identity) | EcohubtORF19915P | |
| 19920 | AAA family ATPase | |||
| 20075 | 5-nucleotidase | |||
| 20080 | R | EcoWI (100% identity) | GAAC | EcohubtORF20080P |
| 20085 | integrase arm-type DNA-binding domain-containing | |||
| 22480 | 345 aa hypothetical protein | |||
| 22485 | M | M.EcosE2ORF21575P (100% identity) | GGCC | M.EcohubtORF22485P |
| 22490 | 68 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19915 | HNH endonuclease | |||
| 19920 | R | SflN101McrBP (100% identity) | EcohubtMcrBP | |
| 19925 | R | EcoWMcrCP (100% identity) | EcohubtMcrCP | |
| 19930 | 128 aa hypothetical protein | |||