Escherichia coli DLI.6n |
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Putative Escherichia coli DLI.6n RM systems
Ref: Ibarra,D.L. et al. unpublished
REBASE ref # 35188
Complete sequence: 5,008,670 bp
GenBank #: CP103974
REBASE acronym: EcoDLI6n
Org_num: 61542
All begin NZ657_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20685 | adenine/cytosine-specific restriction | |||
| 20690 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoDLI6nORF20695P |
| 20695 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoDLI6nORF20695P |
| 20700 | S | S.EcosBORF22035P (99% identity) | TGANNNNNNNNTGCT | S.EcoDLI6nORF20695P |
| 20705 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1745 | cell division protein DamX | |||
| 1750 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDLI6nDamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2395 | DUF2556 family protein | |||
| 2400 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoDLI6nORF2400P |
| 2405 | DNA-binding transcriptional regulator Fis | |||
| 9230 | PerC family transcriptional regulator | |||
| 9235 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoDLI6nORF9235P |
| 9240 | LexA family transcriptional regulator | |||
| 9260 | antiterminator Q family protein | |||
| 9265 | M | M.EcoLR03ORF33110P (100% identity) | M.EcoDLI6nORF9265P | |
| 9270 | AAA family ATPase | |||
| 9900 | phosphohydrolase | |||
| 9905 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoDLI6nDcmP |
| 9910 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoDLI6nDcmP |
| 9915 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20680 | GTPase | |||
| 20685 | R | Ssp28760MrrP (100% identity) | EcoDLI6nMrrP | |
| 20690 | type I restriction-modification system | |||
| 20705 | endoribonuclease SymE | |||
| 20710 | R | Ssp28760McrBP (100% identity) | EcoDLI6nMcrBP | |
| 20715 | R | Ssp28760McrCP (100% identity) | EcoDLI6nMcrCP | |