Escherichia coli 1579 |
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Putative Escherichia coli 1579 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 5,131,607 bp | CP103718 |
| plasmid pMB3176_1: | 250,715 bp | CP103719 |
| plasmid pMB3176_2: | 83,426 bp | CP103720 |
REBASE acronym: Eco1579
Org_num: 61473
All begin M5S87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20765 | adenine/cytosine-specific restriction | |||
| 20770 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco1579ORF20775P |
| 20775 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco1579ORF20775P |
| 20780 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco1579ORF20775P |
| 20785 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | cell division protein DamX | |||
| 1865 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1579DamP |
| 1870 | ribulose-phosphate 3-epimerase | |||
| 2390 | DUF2556 family protein | |||
| 2395 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco1579ORF2395P |
| 2400 | DNA-binding transcriptional regulator Fis | |||
| 14880 | drug/metabolite exporter YedA | |||
| 14885 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco1579DcmP |
| 14890 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco1579DcmP |
| 14895 | HD domain-containing protein | |||
| plasmid pMB3176_1 | ||||
| 24740 | 103 aa hypothetical protein | |||
| 24745 | M | M.Ecowhn14ORF35P (100% identity) | M.Eco1579ORF24745P | |
| 24750 | 73 aa hypothetical protein | |||
| 25165 | recombination-associated protein RdgC | |||
| 25170 | M | M.Eco25985ORF25860P (100% identity) | M.Eco1579ORF25170P | |
| 25175 | 55 aa hypothetical protein | |||
| plasmid pMB3176_2 | ||||
| 26420 | 103 aa hypothetical protein | |||
| 26425 | M | M.EcoXJ51ORF23305P (100% identity) | SAY | M.Eco1579ORF26425P |
| 26430 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMB3176_1 | ||||
| 25435 | maturation control protein | |||
| 25440 | R | SenSL0052ORF25975P (100% identity) | AGACC | Eco1579ORF25445P |
| 25445 | M | M.SenSL0052ORF25975P (100% identity) | AGACC | M.Eco1579ORF25445P |
| 25450 | modulator protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20760 | GTPase | |||
| 20765 | R | EcosS1MrrP (100% identity) | Eco1579MrrP | |
| 20770 | type I restriction-modification system | |||