Escherichia coli p10B |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli p10B RM systems
Ref: Shropshire,W.C. et al. J Antimicrob Chemother 76 (2), 385-395 (2021)
REBASE ref # 35196
Complete sequence: 4,747,694 bp
GenBank #: CP103758
REBASE acronym: Ecop10B
Org_num: 61577
All begin NYO15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9450 | IS1 family transposase | |||
| 9455 | R | EcosNDM5ORF9185P (100% identity) | Ecop10BORF9455P | |
| 9460 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1670 | cell division protein DamX | |||
| 1675 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecop10BDamP |
| 1680 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Ecop10BORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 6740 | helix-turn-helix domain-containing protein | |||
| 6745 | M | M.KpnLH102AORF6435P (100% identity) | M.Ecop10BORF6745P | |
| 6750 | DUF968 domain-containing protein | |||
| 8860 | antitoxin | |||
| 8865 | M | M.KpnOC511ORF4989P (100% identity) | M.Ecop10BORF8865P | |
| 8870 | 114 aa hypothetical protein | |||
| 8915 | conserved phage C-terminal domain-containing | |||
| 8920 | M | M.Ecop10AORF14235P (100% identity) | M.Ecop10BORF8920P | |
| 8925 | RusA family crossover junction | |||
| 9135 | phosphohydrolase | |||
| 9140 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Ecop10BDcmP |
| 9145 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Ecop10BDcmP |
| 9150 | drug/metabolite exporter YedA | |||
| 14745 | replication endonuclease | |||
| 14750 | M | M.Ecop10AORF8435P (100% identity) | GATC | M.Ecop10BORF14750P |
| 14755 | TraR/DksA family transcriptional regulator | |||
| 17895 | phage holin, lambda family | |||
| 17900 | M | M.SflSTLE1ORF5465P (100% identity) | M.Ecop10BORF17900P | |
| 17905 | 95 aa hypothetical protein | |||
| 19835 | HNH endonuclease | |||
| 19840 | R | SflSTLE4ORF19250P (100% identity) | Ecop10BORF19840P | |
| 19845 | McrC family protein | |||
| 20140 | sigma 54-interacting transcriptional regulator | |||
| 20145 | R | EcoR43ORF25510P (80% identity) | Ecop10BORF20145P | |
| 20150 | IS21-like element IS100 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17720 | DinI family protein | |||
| 17725 | R | Ecop10AGmrSDP (100% identity) | Ecop10BGmrSDP | |
| 17730 | 28 aa hypothetical protein | |||
| 19840 | HNH endonuclease | |||
| 19845 | R | SflSTLE4McrCP (100% identity) | Ecop10BMcrCP | |
| 19850 | ATP-binding protein | |||