Escherichia coli O25b:H4-ST131 2822 |
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Putative Escherichia coli O25b:H4-ST131 2822 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,890,300 bp | CP103742 |
| plasmid pMB2855_1: | 136,642 bp | CP103743 |
| plasmid pMB2855_2: | 72,458 bp | CP103744 |
REBASE acronym: Eco2822
Org_num: 61557
All begin M5R22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18290 | type IV toxin-antitoxin system AbiEi family | |||
| 18295 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco2822ORF18300P |
| 18300 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco2822ORF18300P |
| 18305 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco2822ORF18300P |
| 18310 | ash family protein | |||
| plasmid pMB2855_1 | ||||
| 24505 | type II toxin-antitoxin system Phd/YefM family | |||
| 24510 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco2822ORF24510P |
| 24515 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco2822ORF24510P |
| 24520 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco2822ORF24510P |
| 24525 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2822DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco2822ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9580 | phosphohydrolase | |||
| 9585 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco2822DcmP |
| 9590 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco2822DcmP |
| 9595 | drug/metabolite exporter YedA | |||
| 16795 | helix-turn-helix domain-containing protein | |||
| 16800 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco2822ORF16800P | |
| 16805 | 71 aa hypothetical protein | |||
| 20515 | 174 aa hypothetical protein | |||
| 20520 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco2822ORF20520P |
| 20525 | ATP-binding protein | |||
| 20530 | response regulator receiver domain | |||
| 20535 | R | Ecos19ORF20635P (100% identity) | Eco2822ORF20535P | |
| 20540 | 97 aa hypothetical protein | |||
| plasmid pMB2855_1 | ||||
| 23775 | 103 aa hypothetical protein | |||
| 23780 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco2822ORF23780P |
| 23785 | 73 aa hypothetical protein | |||
| plasmid pMB2855_2 | ||||
| 24575 | 103 aa hypothetical protein | |||
| 24580 | M | M.Ecop11BORF27295P (100% identity) | M.Eco2822ORF24580P | |
| 24585 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20220 | glycosyltransferase | |||
| 20225 | R | EcosS3McrBP (100% identity) | Eco2822McrBP | |
| 20230 | R | EcosS9McrCP (100% identity) | Eco2822McrCP | |
| 20235 | Alw26I/Eco31I/Esp3I family type II restriction | |||