Escherichia coli 4012 |
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Putative Escherichia coli 4012 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,859,834 bp | CP103626 |
| plasmid pMB6206_2: | 86,843 bp | CP103628 |
REBASE acronym: Eco4012
Org_num: 61523
All begin M5S78_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1680 | cell division protein DamX | |||
| 1685 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4012DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco4012ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 5725 | TraR/DksA family transcriptional regulator | |||
| 5730 | M | M.EcoD3ORF17225P (100% identity) | GATC | M.Eco4012ORF5730P |
| 5735 | replication endonuclease | |||
| 18190 | phage holin, lambda family | |||
| 18195 | M | M.Eco061ORF262P (99% identity) | M.Eco4012ORF18195P | |
| 18200 | 67 aa hypothetical protein | |||
| plasmid pMB6206_2 | ||||
| 24705 | 73 aa hypothetical protein | |||
| 24710 | M | M.EcoSCU204ORF26105P (100% identity) | M.Eco4012ORF24710P | |
| 24715 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18025 | DinI family protein | |||
| 18030 | R | EcoET654GmrSDP (100% identity) | Eco4012GmrSDP | |
| 18035 | recombinase family protein | |||