Escherichia coli O25b:H4-ST131 |
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Putative Escherichia coli O25b:H4-ST131 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,918,768 bp | CP103710 |
| plasmid pMB3266_1: | 178,234 bp | CP103711 |
| plasmid pMB3266_2: | 81,007 bp | CP103712 |
REBASE acronym: EcoST131a
Org_num: 61556
All begin M5S69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20320 | restriction endonuclease | |||
| 20325 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoST131aORF20325P |
| 20330 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoST131aORF20325P |
| 20335 | R | Ecou021ORF19870P (99% identity) | RTACNNNNGTG | EcoST131aORF20325P |
| 20340 | endoribonuclease SymE | |||
| plasmid pMB3266_2 | ||||
| 25670 | type II toxin-antitoxin system Phd/YefM family | |||
| 25675 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoST131aORF25675P |
| 25680 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoST131aORF25675P |
| 25685 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoST131aORF25675P |
| 25690 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoST131aDamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoST131aORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 8870 | phosphohydrolase | |||
| 8875 | M | M.EcosST131DcmP (100% identity) | CCWGG | M.EcoST131aDcmP |
| 8880 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoST131aDcmP |
| 8885 | drug/metabolite exporter YedA | |||
| 8995 | helix-turn-helix domain-containing protein | |||
| 9000 | M | M.KaeCRE8ORF15605P (99% identity) | M.EcoST131aORF9000P | |
| 9005 | 71 aa hypothetical protein | |||
| 12715 | DUF3927 family protein | |||
| 12730 | M | M.EcosST131ORF13660P (100% identity) | A | M.EcoST131aORF12730P |
| 12735 | TrmB family transcriptional regulator | |||
| 14985 | helix-turn-helix domain-containing protein | |||
| 14990 | M | M.KpnYN1ORFGP (89% identity) | M.EcoST131aORF14990P | |
| 14995 | 71 aa hypothetical protein | |||
| plasmid pMB3266_1 | ||||
| 24375 | 143 aa hypothetical protein | |||
| 24380 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.EcoST131aORF24380P |
| 24385 | 100 aa hypothetical protein | |||
| 24725 | 149 aa hypothetical protein | |||
| 24730 | M | M.YrupYR1ORFAP (83% identity) | CAGCTG | M.EcoST131aORF24730P |
| 24735 | IS21-like element ISAs29 family transposase | |||
| plasmid pMB3266_2 | ||||
| 25235 | 103 aa hypothetical protein | |||
| 25240 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoST131aORF25240P |
| 25245 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20315 | BrnT family toxin | |||
| 20320 | R | Ecou021MrrP (100% identity) | EcoST131aMrrP | |
| 20325 | type I restriction-modification system subunit | |||
| 20660 | glycosyltransferase | |||
| 20665 | R | EcosST131McrBP (100% identity) | EcoST131aMcrBP | |
| 20670 | R | EcosST131McrCP (60% identity) | EcoST131aMcrCP | |
| 20675 | Alw26I/Eco31I/Esp3I family type II restriction | |||