Escherichia coli 4069 |
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Putative Escherichia coli 4069 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
Complete sequence: 5,087,395 bp
GenBank #: CP103673
REBASE acronym: Eco4069
Org_num: 61524
All begin M4U10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8285 | M48 family metallopeptidase | |||
| 8290 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco4069ORF8310P |
| 8295 | macro domain-containing protein | |||
| 8300 | DUF4433 domain-containing protein | |||
| 8305 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Eco4069ORF8310P |
| 8310 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco4069ORF8310P |
| 8315 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1965 | cell division protein DamX | |||
| 1970 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4069DamP |
| 1975 | ribulose-phosphate 3-epimerase | |||
| 2500 | DUF2556 family protein | |||
| 2505 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco4069ORF2505P |
| 2510 | DNA-binding transcriptional regulator Fis | |||
| 13890 | drug/metabolite exporter YedA | |||
| 13895 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco4069DcmP |
| 13900 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.Eco4069DcmP |
| 13905 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3320 | type I restriction-modification system subunit | |||
| 3325 | R | Ecost88MrrP (100% identity) | Eco4069MrrP | |
| 3330 | 34 aa hypothetical protein | |||