Escherichia coli 5264 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 5264 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,741,019 bp | CP103540 |
| plasmid pMB9081_1: | 140,210 bp | CP103541 |
REBASE acronym: Eco5264
Org_num: 61531
All begin M5S66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9305 | IS1 family transposase | |||
| 9310 | R | EcosNDM5ORF9185P (100% identity) | Eco5264ORF9310P | |
| 9315 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 395 | ProQ/FinO family protein | |||
| 400 | M | M.SflFF24DndBP (100% identity) | M.Eco5264DndBP | |
| 405 | DNA phosphorothioation system sulfurtransferase | |||
| 400 | DNA sulfur modification protein DndB | |||
| 405 | M | M.SflFF24DndCP (100% identity) | M.Eco5264DndCP | |
| 410 | DNA sulfur modification protein DndD | |||
| 405 | DNA phosphorothioation system sulfurtransferase | |||
| 410 | M | M.SflFF24DndDP (100% identity) | M.Eco5264DndDP | |
| 415 | DNA sulfur modification protein DndE | |||
| 410 | DNA sulfur modification protein DndD | |||
| 415 | M | M.SflFF24DndEP (100% identity) | M.Eco5264DndEP | |
| 420 | DNA phosphorothioation-associated DGQHR protein | |||
| 425 | 172 aa hypothetical protein | |||
| 430 | R | Sen8497DptHP (100% identity) | Eco5264DptHP | |
| 435 | DNA phosphorothioation-dependent restriction | |||
| 430 | DNA phosphorothioation-dependent restriction | |||
| 435 | R | Sen8497DptGP (100% identity) | Eco5264DptGP | |
| 440 | DNA phosphorothioation-dependent restriction | |||
| 435 | DNA phosphorothioation-dependent restriction | |||
| 440 | R | SenLY67DptFP (100% identity) | Eco5264DptFP | |
| 445 | integrase | |||
| 1880 | cell division protein DamX | |||
| 1885 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5264DamP |
| 1890 | ribulose-phosphate 3-epimerase | |||
| 2505 | 26 aa hypothetical protein | |||
| 2510 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco5264ORF2510P |
| 2515 | DNA-binding transcriptional regulator Fis | |||
| 8990 | phosphohydrolase | |||
| 8995 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.Eco5264DcmP |
| 9000 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco5264DcmP |
| 9005 | drug/metabolite exporter YedA | |||
| 17820 | LexA family transcriptional regulator | |||
| 17825 | M | M.Sso8ORF17910P (100% identity) | GATC | M.Eco5264ORF17825P |
| 17830 | PerC family transcriptional regulator | |||
| 19685 | HNH endonuclease | |||
| 19690 | R | Sso8ORF19860P (100% identity) | Eco5264ORF19690P | |
| 19695 | 55 aa hypothetical protein | |||
| plasmid pMB9081_1 | ||||
| 22900 | 103 aa hypothetical protein | |||
| 22905 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco5264ORF22905P |
| 22910 | 73 aa hypothetical protein | |||