Escherichia coli 5270 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 5270 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 5,001,433 bp | CP103529 |
| plasmid pMB9245_1: | 133,836 bp | CP103530 |
REBASE acronym: Eco5270
Org_num: 61532
All begin M5T24_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1845 | cell division protein DamX | |||
| 1850 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5270DamP |
| 1855 | ribulose-phosphate 3-epimerase | |||
| 2470 | 26 aa hypothetical protein | |||
| 2475 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco5270ORF2475P |
| 2480 | DNA-binding transcriptional regulator Fis | |||
| 7440 | helix-turn-helix domain-containing protein | |||
| 7445 | M | M.Kpn75ORF17070P (100% identity) | M.Eco5270ORF7445P | |
| 7450 | RusA family crossover junction | |||
| 18690 | zinc ribbon domain-containing protein | |||
| 18695 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco5270ORF18695P |
| 18700 | tyrosine-type recombinase/integrase | |||
| 18940 | LexA family transcriptional regulator | |||
| 18945 | M | M.Sso8ORF17910P (100% identity) | GATC | M.Eco5270ORF18945P |
| 18950 | PerC family transcriptional regulator | |||
| 20785 | HNH endonuclease | |||
| 20790 | R | Sso8ORF19860P (100% identity) | Eco5270ORF20790P | |
| 20795 | 55 aa hypothetical protein | |||
| plasmid pMB9245_1 | ||||
| 24155 | 103 aa hypothetical protein | |||
| 24160 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco5270ORF24160P | |
| 24165 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 400 | AIPR family protein | |||
| 405 | M | M.EcosEC29ORF22195P (100% identity) | GTCTC | M.Eco5270ORF405P |
| 410 | R | EcoOR02AORF13715P (100% identity) | GTCTC | Eco5270ORF405P |
| 415 | 176 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18730 | DinI family protein | |||
| 18735 | R | EcosEC29GmrSDP (100% identity) | Eco5270GmrSDP | |
| 18740 | recombinase family protein | |||