Escherichia coli 3059 |
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Putative Escherichia coli 3059 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
Complete sequence: 5,337,629 bp
GenBank #: CP103559
REBASE acronym: Eco3059
Org_num: 61518
All begin M5T18_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1855 | cell division protein DamX | |||
| 1860 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3059DamP |
| 1865 | ribulose-phosphate 3-epimerase | |||
| 2390 | DUF2556 family protein | |||
| 2395 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco3059ORF2395P |
| 2400 | DNA-binding transcriptional regulator Fis | |||
| 9540 | phosphohydrolase | |||
| 9545 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Eco3059DcmP |
| 9550 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco3059DcmP |
| 9555 | drug/metabolite exporter YedA | |||
| 10140 | TrmB family transcriptional regulator | |||
| 10145 | M | M.Ecod58ORF7600P (100% identity) | A | M.Eco3059ORF10145P |
| 10165 | 39 aa hypothetical protein | |||
| 11175 | TrmB family transcriptional regulator | |||
| 11180 | M | M.Eco9097ORF3207P (99% identity) | A | M.Eco3059ORF11180P |
| 11195 | DUF3927 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22180 | 34 aa hypothetical protein | |||
| 22185 | R | Ecost88MrrP (100% identity) | Eco3059MrrP | |
| 22190 | type I restriction-modification system subunit | |||