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Putative Parabacteroides distasonis BFG-149 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,335,774 bp
GenBank #: CP103148
REBASE acronym: Pdi149
Org_num: 61799
All begin NXX59_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
12300 | 132 aa hypothetical protein | |||
12305 | S | S3.PdiPdIVP (99% identity) | S4.Pdi149ORF12330P | |
12310 | S | S4.Pdi157ORF12475P (33% identity) | S3.Pdi149ORF12330P | |
12315 | tyrosine-type recombinase/integrase | |||
12320 | S | S2.PdiPdIV (100% identity) | CAAYNNNNNNNTGG | S2.Pdi149ORF12330P |
12325 | S | S1.Pdi157ORF12475P (100% identity) | S1.Pdi149ORF12330P | |
12330 | M | M.PdiPdIV (100% identity) | M.Pdi149ORF12330P | |
12335 | R | PdiPdIVP (100% identity) | Pdi149ORF12330P | |
12340 | C | C.PdiPdIVP (100% identity) | C.Pdi149ORF12330P | |
12345 | TIR domain-containing protein | |||
12420 | AAA family ATPase | |||
12425 | M | M.Pdi157ORF12575P (100% identity) | M.Pdi149ORF12425P | |
12430 | metallophosphoesterase | |||
12470 | DUF6078 family protein | |||
12475 | R | Pdi157ORF12640P (100% identity) | Pdi149ORF12490P | |
12480 | S | S.Pdi157ORF12640P (100% identity) | S.Pdi149ORF12490P | |
12485 | AAA family ATPase | |||
12490 | M | M.Pdi157ORF12640P (100% identity) | M.Pdi149ORF12490P | |
12495 | GIY-YIG nuclease family protein | |||
17405 | 132 aa hypothetical protein | |||
17410 | S | S2.PdiS2PDORF3300P (58% identity) | S3.Pdi149ORF17465P | |
17415 | 134 aa hypothetical protein | |||
17420 | transposase | |||
17425 | 455 aa hypothetical protein | |||
17430 | IS1380 family transposase | |||
17435 | tyrosine-type recombinase/integrase | |||
17440 | S | S3.PdiS2PDORF3300P (59% identity) | S2.Pdi149ORF17465P | |
17445 | S | S1.PdiS2PDORF3300P (97% identity) | S1.Pdi149ORF17465P | |
17450 | 143 aa hypothetical protein | |||
17455 | 141 aa hypothetical protein | |||
17460 | virulence RhuM family protein | |||
17465 | M | M.PdiS2PDORF3300P (100% identity) | M.Pdi149ORF17465P | |
17470 | R | PdiS2PDORF3300P (100% identity) | Pdi149ORF17465P | |
17475 | C | C.PdiS2PDORF3300P (100% identity) | C.Pdi149ORF17465P | |
17480 | GIY-YIG nuclease family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
13205 | 401 aa hypothetical protein | |||
13210 | RM | Pdi157ORF13375P (80% identity) | Pdi149ORF13210P | |
13215 | site-specific integrase | |||
15230 | DUF6383 domain-containing protein | |||
15235 | M | M.PmeBin29ORFBP (100% identity) | CCWGG | M.Pdi149ORF15235P |
15240 | helix-turn-helix domain-containing protein | |||
15245 | R | PspCT06IIP (100% identity) | CCWGG | Pdi149ORF15235P |
15250 | PCMD domain-containing protein | |||
16645 | fructose-6-phosphate aldolase | |||
16650 | M | M.Pdi157ORF16875P (100% identity) | CGCG | M.Pdi149ORF16650P |
16655 | TolB-like 6-bladed beta-propeller | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
12265 | mobilization protein | |||
12270 | R | Pdi157MrrP (100% identity) | Pdi149MrrP | |
12275 | helix-turn-helix domain-containing protein |