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Putative Pseudomonas aeruginosa SCAID TCT1-2022 (325) RM systems
Ref: Korotetskiy,I. et al. unpublished
REBASE ref # 35193
Complete sequence: 6,871,852 bp
GenBank #: CP102944
REBASE acronym: Pae325
Org_num: 61858
All begin NW342_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
485 | site-specific integrase | |||
490 | M | M.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | M.Pae325ORF490P |
495 | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.Pae325ORF490P |
500 | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | Pae325ORF490P |
505 | helix-turn-helix domain-containing protein | |||
2010 | M48 family metallopeptidase | |||
2015 | R | Ssp0042ORF670P (100% identity) | Pae325ORF2050P | |
2020 | VWA domain-containing protein | |||
2025 | AAA family ATPase | |||
2030 | PD-(D/E)XK nuclease family protein | |||
2035 | virulence RhuM family protein | |||
2040 | DUF6161 domain-containing protein | |||
2045 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S1.Pae325ORF2050P |
2050 | M | M.PmoB5ORF1050P (100% identity) | M.Pae325ORF2050P | |
2055 | S | S2.PfuBORF425P (100% identity) | S2.Pae325ORF2050P | |
2060 | 93 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
25 | RM | Paes32ORF5P (100% identity) | GATCGAG | Pae325ORF25P |
30 | 83 aa hypothetical protein | |||
11735 | 70 aa hypothetical protein | |||
11740 | M | M.PaeP13ORF19105P (100% identity) | M.Pae325ORF11740P | |
11745 | IS3 family transposase | |||
22430 | nucleoid-associated protein YejK | |||
22435 | M | M.PaeM801ORFBP (100% identity) | M.Pae325ORF22435P | |
22440 | Arc family DNA-binding protein | |||
22795 | ParB/Srx family N-terminal domain-containing | |||
22800 | M | M.PaeM801ORFGP (100% identity) | M.Pae325ORF22800P | |
22805 | 72 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
12415 | AIPR family protein | |||
12420 | M | M.Paes32ORF4058P (100% identity) | CACACC | M.Pae325ORF12420P |
12425 | R | Paes32ORF4058P (100% identity) | CACACC | Pae325ORF12420P |
12430 | IS3 family transposase |