Escherichia coli PI6 |
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Putative Escherichia coli PI6 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,652,192 bp | CP074042 |
| plasmid pYLPI6a: | 96,383 bp | CP074043 |
| plasmid pYLPI6b: | 44,800 bp | CP074044 |
REBASE acronym: EcoPI6
Org_num: 60944
All begin KFU63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLPI6a | ||||
| 22110 | IS3 family transposase | |||
| 22115 | R | Efe41C20ORF22770P (100% identity) | EcoPI6ORF22130P | |
| 22120 | DUF4268 domain-containing protein | |||
| 22125 | S | S.EcoCEC0010ORF3360P (99% identity) | S.EcoPI6ORF22130P | |
| 22130 | M | M.Eco4CCORF42950P (100% identity) | M.EcoPI6ORF22130P | |
| 22135 | SPFH/Band 7/PHB domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1870 | cell division protein DamX | |||
| 1875 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPI6DamP |
| 1880 | ribulose-phosphate 3-epimerase | |||
| 2405 | DUF2556 family protein | |||
| 2410 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.EcoPI6ORF2410P |
| 2415 | DNA-binding transcriptional regulator Fis | |||
| 9010 | phosphohydrolase | |||
| 9015 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoPI6DcmP |
| 9020 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoPI6DcmP |
| 9025 | drug/metabolite exporter YedA | |||
| 19105 | HNH endonuclease | |||
| 19110 | R | EcoWCTORF19980P (100% identity) | EcoPI6ORF19110P | |
| 19115 | 332 aa hypothetical protein | |||
| plasmid pYLPI6b | ||||
| 22705 | IS1 family transposase | |||
| 22710 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoPI6ORF22710P |
| 22715 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | EcoPI6ORF22710P |
| 22720 | IS5 family transposase | |||