Escherichia coli PI7 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli PI7 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,904,779 bp | CP074033 |
| plasmid pYLPI7b: | 90,815 bp | CP074035 |
| plasmid pYLPI7c: | 88,772 bp | CP074036 |
REBASE acronym: EcoPI7
Org_num: 60945
All begin KFU70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12055 | adenine/cytosine-specific restriction | |||
| 12060 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoPI7ORF12065P |
| 12065 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoPI7ORF12065P |
| 12070 | S | S.Eco8523ORF19985P (100% identity) | TGANNNNNNNNTGCT | S.EcoPI7ORF12065P |
| 12075 | endoribonuclease SymE | |||
| plasmid pYLPI7b | ||||
| 24300 | type II toxin-antitoxin system Phd/YefM family | |||
| 24305 | M | M.EcoS321ORF25465P (100% identity) | M.EcoPI7ORF24305P | |
| 24310 | S | S.Eco087ORF27595P (100% identity) | S.EcoPI7ORF24305P | |
| 24315 | R | EcoS321ORF25465P (100% identity) | EcoPI7ORF24305P | |
| 24320 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 855 | phosphohydrolase | |||
| 860 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoPI7DcmP |
| 865 | V | V.EcosPA11DcmP (100% identity) | V.EcoPI7DcmP | |
| 870 | drug/metabolite exporter YedA | |||
| 4705 | DUF3927 family protein | |||
| 4720 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoPI7ORF4720P |
| 4725 | TrmB family transcriptional regulator | |||
| 11765 | phage lysis protein EssD | |||
| 11770 | M | M.Ecoi012ORF10825P (100% identity) | M.EcoPI7ORF11770P | |
| 11775 | 67 aa hypothetical protein | |||
| 17145 | cell division protein DamX | |||
| 17150 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPI7DamP |
| 17155 | ribulose-phosphate 3-epimerase | |||
| 17700 | DUF2556 family protein | |||
| 17705 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.EcoPI7ORF17705P |
| 17710 | DNA-binding transcriptional regulator Fis | |||
| plasmid pYLPI7b | ||||
| 24410 | tellurite/colicin resistance protein | |||
| 24425 | M | M.Sen9102ORF23126P (99% identity) | M.EcoPI7ORF24425P | |
| 24430 | recombination-associated protein RdgC | |||
| plasmid pYLPI7c | ||||
| 24830 | 103 aa hypothetical protein | |||
| 24835 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.EcoPI7ORF24835P |
| 24840 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12050 | GTPase | |||
| 12055 | R | Eco44C17MrrP (100% identity) | EcoPI7MrrP | |
| 12060 | type I restriction-modification system | |||
| 12075 | endoribonuclease SymE | |||
| 12080 | R | Ssp28760McrBP (100% identity) | EcoPI7McrBP | |
| 12085 | R | Ssp28760McrCP (100% identity) | EcoPI7McrCP | |