Escherichia coli PK13 |
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Putative Escherichia coli PK13 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,782,877 bp | CP074028 |
| plasmid pYLPK13a: | 32,666 bp | CP074029 |
REBASE acronym: EcoPK13
Org_num: 60947
All begin KFU76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11630 | DUF45 domain-containing protein | |||
| 11635 | M | M.Ecostr10ORF18570P (100% identity) | M.EcoPK13ORF11635P | |
| 11640 | S | S.Ecostr10ORF18570P (100% identity) | S.EcoPK13ORF11635P | |
| 11645 | DUF4102 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 780 | phosphohydrolase | |||
| 785 | M | M.EcoL53DcmP (100% identity) | CCWGG | M.EcoPK13DcmP |
| 790 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.EcoPK13DcmP |
| 795 | drug/metabolite exporter YedA | |||
| 2875 | DUF977 family protein | |||
| ??? | M | M.Ecoi029ORF11125P (100% identity) | M.EcoPK13ORF2880P | |
| 2885 | 60 aa hypothetical protein | |||
| 16240 | cell division protein DamX | |||
| 16245 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPK13DamP |
| 16250 | ribulose-phosphate 3-epimerase | |||
| 16795 | DUF2556 family protein | |||
| 16800 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoPK13ORF16800P |
| 16805 | DNA-binding transcriptional regulator Fis | |||
| plasmid pYLPK13a | ||||
| 23050 | IS1380-like element ISEc9 family transposase | |||
| 23055 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | EcoPK13ORF23060P |
| 23060 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoPK13ORF23060P |
| 23065 | IS1 family transposase | |||