Escherichia coli PM7 |
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Putative Escherichia coli PM7 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,651,255 bp | CP073996 |
| plasmid pYLPM7a: | 112,588 bp | CP073997 |
REBASE acronym: EcoPM7
Org_num: 60951
All begin KFU86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLPM7a | ||||
| 22980 | DNA polymerase III subunit theta | |||
| 22985 | M | M.EcoNDM34ORF24530P (100% identity) | M.EcoPM7ORF22985P | |
| 22990 | S | S.EcoNDM34ORF24530P (100% identity) | S.EcoPM7ORF22985P | |
| 22995 | R | EcoNDM34ORF24530P (100% identity) | EcoPM7ORF22985P | |
| 23000 | 158 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5395 | drug/metabolite exporter YedA | |||
| 5400 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoPM7DcmP |
| 5405 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoPM7DcmP |
| 5410 | phosphohydrolase | |||
| 11980 | DNA-binding transcriptional regulator Fis | |||
| 11985 | M | M.EcoVL08ORF22070P (100% identity) | ATGCAT | M.EcoPM7ORF11985P |
| 11990 | DUF2556 family protein | |||
| 12510 | ribulose-phosphate 3-epimerase | |||
| 12515 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPM7DamP |
| 12520 | cell division protein DamX | |||
| 17155 | 100 aa hypothetical protein | |||
| 17160 | R | Sso8ORF19860P (100% identity) | EcoPM7ORF17160P | |
| 17165 | HNH endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17140 | DEAD/DEAH box helicase family protein | |||
| 17145 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoPM7ORF17145P |
| 17150 | R | SflN116ORF19490P (100% identity) | GAACC | EcoPM7ORF17145P |
| 17155 | 100 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLPM7a | ||||
| 23035 | 76 aa hypothetical protein | |||
| 23040 | M | M.Sso524ORF460P (100% identity) | GATC | M.EcoPM7ORF23040P |
| 23045 | 269 aa hypothetical protein | |||