Escherichia coli MB1 |
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Putative Escherichia coli MB1 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
Complete sequence: 4,780,610 bp
GenBank #: CP073994
REBASE acronym: EcoMB1
Org_num: 60917
All begin KFU72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5625 | IS1 family transposase | |||
| 5630 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoMB1ORF5640P |
| 5635 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoMB1ORF5640P |
| 5640 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoMB1ORF5640P |
| 5645 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1825 | cell division protein DamX | |||
| 1830 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMB1DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2455 | DUF2556 family protein | |||
| 2460 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoMB1ORF2460P |
| 2465 | DNA-binding transcriptional regulator Fis | |||
| 9280 | phosphohydrolase | |||
| 9285 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoMB1DcmP |
| 9290 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoMB1DcmP |
| 9295 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13240 | isocitrate dehydrogenase | |||
| 13245 | R | EcosEC27McrCP (100% identity) | EcoMB1McrCP | |
| 13250 | R | EcoteDMcrBP (100% identity) | EcoMB1McrBP | |
| 13255 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14795 | replication endonuclease | |||
| 14800 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoMB1ORF14800P |
| 14805 | TraR/DksA family transcriptional regulator | |||