Escherichia coli MB20 |
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Putative Escherichia coli MB20 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,693,340 bp | CP073976 |
| plasmid pYLMB20a: | 241,691 bp | CP073977 |
| plasmid pYLMB20b: | 104,269 bp | CP073978 |
REBASE acronym: EcoMB20
Org_num: 60922
All begin KFU64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19670 | DUF4942 domain-containing protein | |||
| 19675 | M | M.EcoM9868ORF38820P (100% identity) | M.EcoMB20ORF19675P | |
| 19680 | IS3 family transposase | |||
| 19685 | IS3-like element IS3 family transposase | |||
| 19690 | S | S.EcoE89ORF20175P (95% identity) | S.EcoMB20ORF19675P | |
| 19695 | R | EcoYPE3ORF20380P (100% identity) | EcoMB20ORF19675P | |
| 19705 | NADPH-dependent aldehyde reductase Ahr | |||
| plasmid pYLMB20b | ||||
| 24225 | type II toxin-antitoxin system Phd/YefM family | |||
| 24230 | M | M.EcoPSS16ORF42490P (99% identity) | M.EcoMB20ORF24230P | |
| 24235 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMB20DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2390 | DUF2556 family protein | |||
| 2395 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoMB20ORF2395P |
| 2400 | DNA-binding transcriptional regulator Fis | |||
| 3800 | DEAD/DEAH box helicase | |||
| 3805 | RM | EcosEC22ORF23360P (95% identity) | EcoMB20ORF3805P | |
| 8565 | phosphohydrolase | |||
| 8570 | M | M.SflN116DcmP (100% identity) | CCWGG | M.EcoMB20DcmP |
| 8575 | V | V.SflN116DcmP (100% identity) | CCWGG | V.EcoMB20DcmP |
| 8580 | drug/metabolite exporter YedA | |||
| 14775 | replication endonuclease | |||
| 14780 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoMB20ORF14780P |
| 14785 | TraR/DksA family transcriptional regulator | |||
| 19650 | HNH endonuclease | |||
| 19655 | R | SflFF17ORF19275P (100% identity) | EcoMB20ORF19655P | |
| 19660 | McrC family protein | |||
| plasmid pYLMB20a | ||||
| 23285 | 55 aa hypothetical protein | |||
| 23290 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoMB20ORF23290P |
| 23295 | thermonuclease family protein | |||
| 23660 | 48 aa hypothetical protein | |||
| 23665 | M | M.YpsF1ORFBP (100% identity) | M.EcoMB20ORF23665P | |
| 23670 | 202 aa hypothetical protein | |||
| 23790 | DNA-binding protein | |||
| 23795 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoMB20ORF23795P |
| 23800 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19655 | HNH endonuclease | |||
| 19660 | R | EcoYPE3McrCP (100% identity) | EcoMB20McrCP | |
| 19665 | McrB family protein | |||
| 19660 | McrC family protein | |||
| 19665 | R | EcoYPE3McrBP (100% identity) | EcoMB20McrBP | |
| 19670 | DUF4942 domain-containing protein | |||