Escherichia coli MB30 |
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Putative Escherichia coli MB30 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,769,045 bp | CP073968 |
| plasmid pYLMB30a: | 247,187 bp | CP073969 |
| plasmid pYLMB30b: | 141,466 bp | CP073970 |
| plasmid pYLMB30c: | 112,094 bp | CP073971 |
REBASE acronym: EcoMB30
Org_num: 60924
All begin KFU82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLMB30b | ||||
| 24740 | 3-phosphatase | |||
| 24745 | R | Efe44C21ORF22625P (100% identity) | EcoMB30ORF24755P | |
| 24750 | S | S1.Efe44C21ORF22625P (100% identity) | S.EcoMB30ORF24755P | |
| 24755 | M | M.EcosS142ORF43560P (100% identity) | M.EcoMB30ORF24755P | |
| 24760 | type II toxin-antitoxin system Phd/YefM family | |||
| plasmid pYLMB30c | ||||
| 25675 | DNA polymerase III subunit theta | |||
| 25680 | M | M.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | M.EcoMB30ORF25680P |
| 25685 | S | S.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | S.EcoMB30ORF25680P |
| 25690 | R | EcoMY18ORF24050P (100% identity) | GAANNNNNNTAYG | EcoMB30ORF25680P |
| 25695 | 163 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMB30DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2445 | DUF2556 family protein | |||
| 2450 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoMB30ORF2450P |
| 2455 | DNA-binding transcriptional regulator Fis | |||
| 9140 | phosphohydrolase | |||
| 9145 | M | M.Eco9064Dcm (99% identity) | CCWGG | M.EcoMB30DcmP |
| 9150 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMB30DcmP |
| 9155 | drug/metabolite exporter YedA | |||
| 15210 | replication endonuclease | |||
| 15215 | M | M.EcoVA1ORFFP (100% identity) | GATC | M.EcoMB30ORF15215P |
| 15220 | TraR/DksA family transcriptional regulator | |||
| 15860 | NinE family protein | |||
| 15865 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoMB30ORF15865P |
| 15870 | recombination protein NinB | |||
| 20030 | phage lysis protein EssD | |||
| 20035 | M | M.Sso63633ORF22290P (100% identity) | M.EcoMB30ORF20035P | |
| 20040 | 67 aa hypothetical protein | |||
| 20070 | LexA family transcriptional regulator | |||
| 20075 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoMB30ORF20075P |
| 20080 | PerC family transcriptional regulator | |||
| plasmid pYLMB30a | ||||
| 23980 | 55 aa hypothetical protein | |||
| 23985 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoMB30ORF23985P |
| 23990 | thermonuclease family protein | |||
| 24355 | 48 aa hypothetical protein | |||
| 24360 | M | M.YpsF1ORFBP (100% identity) | M.EcoMB30ORF24360P | |
| 24365 | 202 aa hypothetical protein | |||
| 24485 | DNA-binding protein | |||
| 24490 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoMB30ORF24490P |
| 24495 | 284 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLMB30c | ||||
| 25735 | 76 aa hypothetical protein | |||
| 25740 | M | M.Sso524ORF460P (100% identity) | GATC | M.EcoMB30ORF25740P |
| 25745 | 269 aa hypothetical protein | |||