Escherichia coli MB46 |
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Putative Escherichia coli MB46 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,750,074 bp | CP073958 |
| plasmid pYLMB46a: | 214,096 bp | CP073959 |
REBASE acronym: EcoMB46
Org_num: 60926
All begin KFU88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3430 | transposase domain-containing protein | |||
| 3435 | R | Eco21EVAORFCP (100% identity) | EcoMB46ORF3445P | |
| 3440 | S | S.Eco03C12ORF22605P (69% identity) | S.EcoMB46ORF3445P | |
| 3445 | M | M.Eco28C20ORF6360P (100% identity) | M.EcoMB46ORF3445P | |
| 3450 | GTPase family protein | |||
| 14165 | GTPase family protein | |||
| 14170 | M | M.Ecos67ORF22160P (100% identity) | M.EcoMB46ORF14170P | |
| 14175 | S | S.Eco26C18ORF18230P (67% identity) | S.EcoMB46ORF14170P | |
| 14180 | R | EcoF138ORF26590P (99% identity) | EcoMB46ORF14170P | |
| 14185 | IS5-like element ISKpn26 family transposase | |||
| 19790 | N-6 DNA methylase | |||
| 19795 | S | S.EcostT2ORF19755P (81% identity) | AAGNNNNNNNRTTTC | S.EcoMB46ORF19795P |
| 19800 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1730 | cell division protein DamX | |||
| 1735 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMB46DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoMB46ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 9305 | phosphohydrolase | |||
| 9310 | M | M.EcoS43DcmP (100% identity) | CCWGG | M.EcoMB46DcmP |
| 9315 | V | V.EcoSFE8DcmP (100% identity) | V.EcoMB46DcmP | |
| 9320 | drug/metabolite exporter YedA | |||
| 11415 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoMB46ORF11420P | |
| 11425 | 95 aa hypothetical protein | |||
| 20000 | IS630-like element ISEc33 family transposase | |||
| 20005 | R | EcostT2ORF19975P (100% identity) | GAAC | EcoMB46ORF20005P |
| 20010 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pYLMB46a | ||||
| 23405 | 55 aa hypothetical protein | |||
| 23410 | M | M.Sens770ORF21675P (100% identity) | M.EcoMB46ORF23410P | |
| 23415 | thermonuclease family protein | |||
| 24130 | DNA-binding protein | |||
| 24135 | M | M.Ype21801ORF197P (100% identity) | M.EcoMB46ORF24135P | |
| 24140 | 273 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14235 | transposase | |||
| 14240 | R | SflN97McrCP (100% identity) | EcoMB46McrCP | |
| 14245 | R | SflN97McrBP (100% identity) | EcoMB46McrBP | |
| 14250 | 141 aa hypothetical protein | |||
| 18000 | 71 aa hypothetical protein | |||
| 18005 | R | SflFF80GmrDP (50% identity) | EcoMB46GmrDP | |
| 18010 | IS1 family transposase | |||