Escherichia coli MB50 |
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Putative Escherichia coli MB50 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,664,121 bp | CP073949 |
| plasmid pYLMB50a: | 117,974 bp | CP073950 |
REBASE acronym: EcoMB50
Org_num: 60928
All begin KFU75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19275 | adenine/cytosine-specific restriction | |||
| 19280 | R | Ecoc20ORFEP (99% identity) | EcoMB50ORF19285P | |
| 19285 | M | M.EcosS142ORF37770P (100% identity) | M.EcoMB50ORF19285P | |
| 19290 | type I restriction endonuclease subunit S | |||
| plasmid pYLMB50a | ||||
| 22695 | type II toxin-antitoxin system Phd/YefM family | |||
| 22700 | M | M.EcoS321ORF25465P (100% identity) | GAANNNNNNNRTCG | M.EcoMB50ORF22700P |
| 22705 | S | S.Eco177ORF27405P (100% identity) | GAANNNNNNNRTCG | S.EcoMB50ORF22700P |
| 22710 | R | EcoC9108IP (99% identity) | GAANNNNNNNRTCG | EcoMB50ORF22700P |
| 22715 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1615 | cell division protein DamX | |||
| 1620 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMB50DamP |
| 1625 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoMB50ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 8820 | phosphohydrolase | |||
| 8825 | M | M.SsoSE61DcmP (99% identity) | CCWGG | M.EcoMB50DcmP |
| 8830 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMB50DcmP |
| 8835 | drug/metabolite exporter YedA | |||
| 14475 | replication endonuclease | |||
| 14480 | M | M.EcosHSORF14470P (100% identity) | GATC | M.EcoMB50ORF14480P |
| 14485 | TraR/DksA family transcriptional regulator | |||
| 19490 | HNH endonuclease | |||
| 19495 | R | Eco7535ORFFP (96% identity) | EcoMB50ORF19495P | |
| 19500 | McrC family protein | |||
| plasmid pYLMB50a | ||||
| 22900 | IS1 family transposase | |||
| 22905 | R | EcoPSJ29ORF43810P (100% identity) | GCWGC | EcoMB50ORF22905P |
| 22910 | helix-turn-helix transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19270 | GTPase | |||
| 19275 | R | SenHNK130MrrP (99% identity) | EcoMB50MrrP | |
| 19280 | type I restriction-modification system | |||
| 19495 | HNH endonuclease | |||
| 19500 | R | Efe38C01McrC2P (99% identity) | EcoMB50McrCP | |
| 19505 | R | EcosA4McrBP (99% identity) | EcoMB50McrBP | |
| 19510 | DUF4942 domain-containing protein | |||