Escherichia coli MB53 |
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Putative Escherichia coli MB53 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,588,635 bp | CP073939 |
| plasmid pYLMB53a: | 112,732 bp | CP073940 |
REBASE acronym: EcoMB53
Org_num: 60931
All begin KFU83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLMB53a | ||||
| 22670 | DNA polymerase III subunit theta | |||
| 22675 | M | M.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | M.EcoMB53ORF22675P |
| 22680 | S | S.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | S.EcoMB53ORF22675P |
| 22685 | R | EcoMY18ORF24050P (100% identity) | GAANNNNNNTAYG | EcoMB53ORF22675P |
| 22690 | 160 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMB53DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2355 | DUF2556 family protein | |||
| 2360 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoMB53ORF2360P |
| 2365 | DNA-binding transcriptional regulator Fis | |||
| 8745 | phosphohydrolase | |||
| 8750 | M | M.SspS13DcmP (99% identity) | CCWGG | M.EcoMB53DcmP |
| 8755 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMB53DcmP |
| 8760 | drug/metabolite exporter YedA | |||
| 19025 | IS1 family transposase | |||
| 19030 | R | Cfr8165ORF3430P (97% identity) | EcoMB53ORF19030P | |
| 19035 | integrase arm-type DNA-binding domain-containing | |||
| 20300 | phage holin, lambda family | |||
| 20305 | M | M.SflLIN17ORF17405P (99% identity) | M.EcoMB53ORF20305P | |
| 20310 | 67 aa hypothetical protein | |||
| 20335 | LexA family transcriptional regulator | |||
| 20340 | M | M.EcoXJ55ORF18610P (100% identity) | GATC | M.EcoMB53ORF20340P |
| 20345 | PerC family transcriptional regulator | |||
| 20600 | glyoxylate bypass operon transcriptional | |||
| 20605 | M | M.EcoPT62ORF20600P (97% identity) | M.EcoMB53ORF20605P | |
| 20610 | bifunctional isocitrate dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLMB53a | ||||
| 22730 | 76 aa hypothetical protein | |||
| 22735 | M | M.EcoLR60ORF48240P (100% identity) | M.EcoMB53ORF22735P | |
| 22740 | 269 aa hypothetical protein | |||