Escherichia coli MB56 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MB56 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,720,983 bp | CP073936 |
| plasmid pYLMB56a: | 46,249 bp | CP073937 |
REBASE acronym: EcoMB56
Org_num: 60932
All begin KFU61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8940 | 388 aa hypothetical protein | |||
| 8945 | M | M.SflLIN17ORF9030P (100% identity) | M.EcoMB56ORF8945P | |
| 8950 | S | S.Cfr50935ORF7025P (95% identity) | S.EcoMB56ORF8945P | |
| 8955 | YecA family protein | |||
| 8960 | R | EcoC9123IP (100% identity) | EcoMB56ORF8945P | |
| 8965 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1595 | cell division protein DamX | |||
| 1600 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMB56DamP |
| 1605 | ribulose-phosphate 3-epimerase | |||
| 2220 | DUF2556 family protein | |||
| 2225 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoMB56ORF2225P |
| 2230 | DNA-binding transcriptional regulator Fis | |||
| 8605 | phosphohydrolase | |||
| 8610 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoMB56DcmP |
| 8615 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMB56DcmP |
| 8620 | drug/metabolite exporter YedA | |||
| 19430 | phage lysis protein EssD | |||
| 19435 | M | M.Sso63633ORF22290P (100% identity) | M.EcoMB56ORF19435P | |
| 19440 | 67 aa hypothetical protein | |||
| plasmid pYLMB56a | ||||
| 22690 | IS1 family transposase | |||
| 22695 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoMB56ORF22695P |
| 22700 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | EcoMB56ORF22695P |
| 22705 | IS1380-like element ISEc9 family transposase | |||