Escherichia coli 442/2 |
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Putative Escherichia coli 442/2 RM systems
Ref: Jobling,M.G. unpublished
REBASE ref # 30829
Complete sequence: 4,831,855 bp
GenBank #: CP076282
REBASE acronym: Ecos4422
Org_num: 60913
All begin A7A15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22910 | NADPH-dependent aldehyde reductase Ahr | |||
| 22920 | R | EcoSTEC636ORF21735P (100% identity) | CYAYNNNNNNNTTAC | Ecos4422ORF22930P |
| 22925 | S | S.EcoSTEC636ORF21735P (100% identity) | CYAYNNNNNNNTTAC | S.Ecos4422ORF22930P |
| 22930 | M | M.EcoSTEC636ORF21735P (100% identity) | CYAYNNNNNNNTTAC | M.Ecos4422ORF22930P |
| 22935 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8610 | 92 aa hypothetical protein | |||
| 8615 | M | M.EspP049ORF1957P (99% identity) | M.Ecos4422ORF8615P | |
| 8620 | TrmB family transcriptional regulator | |||
| 10705 | drug/metabolite exporter YedA | |||
| 10710 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Ecos4422DcmP |
| 10715 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Ecos4422DcmP |
| 10720 | phosphohydrolase | |||
| 14170 | replication endonuclease | |||
| 14175 | M | M.EcoLR25ORF45840P (100% identity) | GATC | M.Ecos4422ORF14175P |
| 14180 | TraR/DksA family transcriptional regulator | |||
| 14220 | 313 aa hypothetical protein | |||
| 14225 | R | Sso8033ORF3755P (100% identity) | CCWGG | Ecos4422ORF14230P |
| 14230 | M | M.SflSTLE1ORF5615P (100% identity) | M.Ecos4422ORF14230P | |
| 14235 | 126 aa hypothetical protein | |||
| 17435 | DNA-binding transcriptional regulator Fis | |||
| 17440 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Ecos4422ORF17440P |
| 17445 | DUF2556 family protein | |||
| 17990 | ribulose-phosphate 3-epimerase | |||
| 17995 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecos4422DamP |
| 18000 | cell division protein DamX | |||
| 21620 | PerC family transcriptional regulator | |||
| 21625 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Ecos4422ORF21625P |
| 21630 | LexA family transcriptional regulator | |||
| 21655 | 67 aa hypothetical protein | |||
| 21660 | M | M.Eco94ECORF19040P (100% identity) | M.Ecos4422ORF21660P | |
| 21665 | phage holin, lambda family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6090 | recombinase family protein | |||
| 6095 | R | Efe1438GmrSDP (100% identity) | Ecos4422GmrSDP | |
| 6100 | NADP-dependent isocitrate dehydrogenase | |||