Escherichia coli CP52E |
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Putative Escherichia coli CP52E RM systems
Ref: Khine,N.O. unpublished
REBASE ref # 34983
| Sequence length: | GenBank #: | |
| Chromosome: | 4,817,373 bp | CP075731 |
| plasmid pCP52E-IncFIB: | 115,794 bp | CP075732 |
| plasmid unnamed: | 6,759 bp | CP075735 |
REBASE acronym: EcoCP52E
Org_num: 60714
All begin KKZ11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17925 | GTPase family protein | |||
| 17930 | M | M.EcoLHM101ORFGP (93% identity) | M.EcoCP52EORF17930P | |
| 17935 | S | S.Ero374ORF20100P (43% identity) | S.EcoCP52EORF17930P | |
| 17940 | IS1 family transposase | |||
| 20930 | DUF262 domain-containing protein | |||
| 20935 | M | M.Eco47C06ORF3990P (99% identity) | M.EcoCP52EORF20935P | |
| 20940 | S | S.Eco2673ORF15450P (70% identity) | S.EcoCP52EORF20935P | |
| 20945 | R | Sen775WIIIP (99% identity) | EcoCP52EORF20935P | |
| 20950 | 388 aa hypothetical protein | |||
| plasmid pCP52E-IncFIB | ||||
| 23650 | IS6-like element IS26 family transposase | |||
| 23655 | M | M.SflFF34ORF9300P (69% identity) | M.EcoCP52EORF23655P | |
| 23660 | type II toxin-antitoxin system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1905 | cell division protein DamX | |||
| 1910 | M | M.EcoXJ52DamP (100% identity) | GATC | M.EcoCP52EDamP |
| 1915 | ribulose-phosphate 3-epimerase | |||
| 2480 | DUF2556 family protein | |||
| 2485 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoCP52EORF2485P |
| 2490 | DNA-binding transcriptional regulator Fis | |||
| 9065 | HD domain-containing protein | |||
| 9070 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoCP52EDcmP |
| 9075 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoCP52EDcmP |
| 9080 | drug/metabolite exporter YedA | |||
| 15285 | NinE family protein | |||
| 15290 | M | M.EcoLHM101ORFIP (96% identity) | GATC | M.EcoCP52EORF15290P |
| 15295 | recombination protein NinB | |||
| 18255 | 62 aa hypothetical protein | |||
| 18260 | M | M.EcoLHM101ORFBP (100% identity) | M.EcoCP52EORF18260P | |
| 18265 | DUF4406 domain-containing protein | |||
| 18330 | 244 aa hypothetical protein | |||
| 18335 | M | M.EcoLHM101ORFCP (100% identity) | M.EcoCP52EORF18335P | |
| 18340 | DUF4060 family protein | |||
| plasmid pCP52E-IncFIB | ||||
| 23520 | 73 aa hypothetical protein | |||
| 23525 | M | M.Eco9269ORFDP (100% identity) | M.EcoCP52EORF23525P | |
| 23530 | 102 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed | ||||
| 23985 | M | M.SenL0047ORF24180P (100% identity) | M.EcoCP52EORF23985P | |
| 23990 | R | SenL0047ORF24180P (100% identity) | EcoCP52EORF23985P | |
| 23980 | Rop family plasmid primer RNA-binding protein | |||