Escherichia coli CPE35 |
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Putative Escherichia coli CPE35 RM systems
Ref: Khine,N.O. unpublished
REBASE ref # 34983
| Sequence length: | GenBank #: | |
| Chromosome: | 4,633,513 bp | CP075722 |
| plasmid pCPE35-IncFIB: | 106,446 bp | CP075723 |
| plasmid pE35-COLE10: | 9,537 bp | CP075726 |
| plasmid pE35-IncFII: | 83,577 bp | CP075725 |
REBASE acronym: EcoCPE35
Org_num: 60715
All begin KKZ10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5495 | IS5 family transposase | |||
| 5500 | M | M.Eco16443ORF4279P (100% identity) | M.EcoCPE35ORF5500P | |
| 5505 | S | S.Kae7ORF22535P (84% identity) | S.EcoCPE35ORF5500P | |
| 5510 | R | EcosAW17ORF21290P (99% identity) | EcoCPE35ORF5500P | |
| 5515 | transposase | |||
| plasmid pE35-IncFII | ||||
| 23890 | ANR family transcriptional regulator | |||
| 23895 | R | SenS1545ORF24780P (100% identity) | EcoCPE35ORF23900P | |
| 23900 | M | M.SenS1545ORF24780P (100% identity) | M.EcoCPE35ORF23900P | |
| 23905 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | cell division protein DamX | |||
| 1655 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCPE35DamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoCPE35ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 8825 | phosphohydrolase | |||
| 8830 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoCPE35DcmP |
| 8835 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoCPE35DcmP |
| 8840 | drug/metabolite exporter YedA | |||
| 17355 | NinE family protein | |||
| 17360 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoCPE35ORF17360P |
| 17365 | recombination protein NinB | |||
| 19140 | HNH endonuclease | |||
| 19145 | R | SflSTLE4ORF19250P (100% identity) | EcoCPE35ORF19145P | |
| 19150 | McrC family protein | |||
| 19380 | sigma 54-interacting transcriptional regulator | |||
| 19385 | R | SflFF87ORF20150P (100% identity) | EcoCPE35ORF19385P | |
| 19390 | IS21-like element IS100 family transposase | |||
| plasmid pE35-COLE10 | ||||
| 23920 | 137 aa hypothetical protein | |||
| 23925 | RM | Mmo24671ORF20525P (98% identity) | EcoCPE35ORF23925P | |
| 23930 | mobilization protein MobX | |||
| plasmid pE35-IncFII | ||||
| 23620 | 103 aa hypothetical protein | |||
| 23625 | M | M.Sso11ORF329P (100% identity) | M.EcoCPE35ORF23625P | |
| 23630 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19145 | HNH endonuclease | |||
| 19150 | R | SflSTLE4McrCP (100% identity) | EcoCPE35McrCP | |
| 19155 | R | SflSTLE4McrBP (100% identity) | EcoCPE35McrBP | |
| 19160 | DUF4942 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14440 | replication endonuclease | |||
| 14445 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoCPE35ORF14445P |
| 14450 | TraR/DksA family transcriptional regulator | |||
| plasmid pCPE35-IncFIB | ||||
| 22775 | 76 aa hypothetical protein | |||
| 22780 | M | M.Ecoppa6ORF24465P (100% identity) | GATC | M.EcoCPE35ORF22780P |
| 22785 | 269 aa hypothetical protein | |||