Escherichia coli CEC13004 |
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Putative Escherichia coli CEC13004 RM systems
Ref: Hayashi,T. and Miyata,T. unpublished
REBASE ref # 34954
| Sequence length: | GenBank #: | |
| Chromosome: | 5,422,445 bp | AP026118 |
| plasmid pCEC13004_1: | 94,960 bp | AP026119 |
REBASE acronym: Eco13004
Org_num: 60623
All begin CEC13004_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 51170 | endoribonuclease SymE | |||
| 51180 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco13004ORF51190P |
| 51190 | M | M.EcoX21ORF4993P (100% identity) | CACNNNNNNNCTGG | M.Eco13004ORF51190P |
| 51200 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco13004ORF51190P |
| 51210 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15640 | 65 aa hypothetical protein | |||
| 15650 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco13004ORF15650P | |
| 15660 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 24190 | inner membrane transporter YedA | |||
| 24200 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco13004DcmP |
| 24210 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco13004DcmP |
| 24220 | phosphohydrolase | |||
| 30130 | antirepressor protein | |||
| 30140 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco13004ORF30140P |
| 30150 | NinB protein | |||
| 30460 | 67 aa hypothetical protein | |||
| 30470 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco13004ORF30470P |
| 30480 | 70 aa hypothetical protein | |||
| 39520 | DNA-binding protein Fis | |||
| 39530 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco13004ORF39530P |
| 39540 | acrEF/envCD operon repressor | |||
| 40490 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13004DamP |
| 40510 | cell division protein DamX | |||
| 48290 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco13004ORF48300P | |
| 48310 | 116 aa hypothetical protein | |||
| 50670 | 55 aa hypothetical protein | |||
| 50680 | R | Eco61312ORF51920P (100% identity) | Eco13004ORF50680P | |
| 50690 | 107 aa hypothetical protein | |||
| 50750 | ATP-dependent helicase | |||
| 50760 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco13004ORF50760P |
| plasmid pCEC13004_1 | ||||
| 52320 | 308 aa hypothetical protein | |||
| 52330 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco13004ORF52330P | |
| 52340 | 73 aa hypothetical protein | |||