Escherichia coli 26_141088 |
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Putative Escherichia coli 26_141088 RM systems
Ref: Hayashi,T. and Miyata,T. unpublished
REBASE ref # 34954
| Sequence length: | GenBank #: | |
| Chromosome: | 5,430,564 bp | AP026090 |
| plasmid pNIID26_1: | 95,894 bp | AP026091 |
REBASE acronym: Eco41088
Org_num: 60611
All begin CL8NIID26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 51250 | endoribonuclease SymE | |||
| 51260 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco41088ORF51270P |
| 51270 | M | M.EcoX21ORF4993P (100% identity) | CACNNNNNNNCTGG | M.Eco41088ORF51270P |
| 51280 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco41088ORF51270P |
| 51290 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16110 | 65 aa hypothetical protein | |||
| 16120 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco41088ORF16120P | |
| 16130 | 179 aa hypothetical protein | |||
| 24170 | inner membrane transporter YedA | |||
| 24180 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco41088DcmP |
| 24190 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco41088DcmP |
| 24200 | phosphohydrolase | |||
| 30080 | antirepressor protein | |||
| 30090 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco41088ORF30090P |
| 30100 | endonuclease | |||
| 30430 | 67 aa hypothetical protein | |||
| 30440 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco41088ORF30440P |
| 30450 | 70 aa hypothetical protein | |||
| 39460 | DNA-binding protein Fis | |||
| 39470 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco41088ORF39470P |
| 39480 | acrEF/envCD operon repressor | |||
| 40440 | ribulose-phosphate 3-epimerase | |||
| 40450 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco41088DamP |
| 40460 | cell division protein DamX | |||
| 48380 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco41088ORF48390P | |
| 48400 | 116 aa hypothetical protein | |||
| 50740 | 55 aa hypothetical protein | |||
| 50750 | R | EcosPA8ORF17350P (100% identity) | Eco41088ORF50750P | |
| 50760 | 107 aa hypothetical protein | |||
| 50820 | ATP-dependent helicase | |||
| 50830 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco41088ORF50830P |
| plasmid pNIID26_1 | ||||
| 52420 | 308 aa hypothetical protein | |||
| 52430 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco41088ORF52430P | |
| 52440 | 73 aa hypothetical protein | |||