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Putative Escherichia coli UTI89-3 RM systems
Ref: Zulk,J. et al. unpublished
REBASE ref # 34956
Complete sequence: 5,065,748 bp
GenBank #: CP092529
REBASE acronym: Eco893
Org_num: 60637
All begin MKD43_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
23940 | endoribonuclease SymE | |||
23945 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco893ORF23950P |
23950 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco893ORF23950P |
23955 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco893ORF23950P |
23960 | adenine/cytosine-specific restriction | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
6990 | TrmB family transcriptional regulator | |||
6995 | M | M.SboBSORF1444P (100% identity) | A | M.Eco893ORF6995P |
7015 | 39 aa hypothetical protein | |||
10335 | drug/metabolite exporter YedA | |||
10340 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco893DcmP |
10345 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco893DcmP |
10350 | phosphohydrolase | |||
14320 | LexA family transcriptional regulator | |||
14325 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco893ORF14325P |
14330 | PerC family transcriptional regulator | |||
17680 | DNA-binding transcriptional regulator Fis | |||
17685 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco893ORF17685P |
17690 | DUF2556 family protein | |||
18470 | ribulose-phosphate 3-epimerase | |||
18475 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco893DamP |
18480 | cell division protein DamX | |||
23405 | response regulator receiver domain | |||
23410 | R | EcosS3ORF15775P (100% identity) | Eco893ORF23415P | |
23415 | M | M.EcosS3ORF15775P (100% identity) | M.Eco893ORF23415P | |
23420 | conjugal transfer protein TraG N-terminal | |||
24180 | PerC family transcriptional regulator | |||
24185 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco893ORF24185P |
24190 | LexA family transcriptional regulator | |||
24220 | 67 aa hypothetical protein | |||
24225 | M | M.Ecos142ORF20090P (100% identity) | M.Eco893ORF24225P | |
24230 | phage lysis protein EssD | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
14125 | DinI-like family protein | |||
14130 | R | EspFAAGmrSDP (100% identity) | Eco893GmrSDP | |
14135 | recombinase family protein | |||
23955 | type I restriction-modification system | |||
23960 | R | EcosS1MrrP (100% identity) | Eco893MrrP | |
23965 | GTPase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
6120 | recombination protein NinB | |||
6125 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco893ORF6125P |
6130 | NinE family protein |