Escherichia coli TUM2798 |
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Putative Escherichia coli TUM2798 RM systems
Ref: Ikegaya,K. et al. unpublished
REBASE ref # 34910
| Sequence length: | GenBank #: | |
| Chromosome: | 4,876,829 bp | AP026476 |
| plasmid pMTY2798_IncF: | 155,167 bp | AP026477 |
| plasmid pMTY2798_IncN: | 50,585 bp | AP026478 |
REBASE acronym: EcoM2798
Org_num: 60405
All begin TUM2798_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30820 | endoribonuclease SymE | |||
| 30830 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoM2798ORF30850P |
| 30840 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoM2798ORF30850P |
| 30850 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoM2798ORF30850P |
| 30860 | 388 aa hypothetical protein | |||
| 34280 | 156 aa hypothetical protein | |||
| 34290 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoM2798ORF34300P |
| 34300 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoM2798ORF34300P |
| 34310 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoM2798ORF34300P |
| 34320 | 260 aa hypothetical protein | |||
| plasmid pMTY2798_IncF | ||||
| 47160 | repressor TnpA | |||
| 47170 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoM2798ORF47190P |
| 47180 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S1.EcoM2798ORF47190P |
| 47190 | M | M.SenceORFJP (100% identity) | CAAYNNNNNCTGG | M.EcoM2798ORF47190P |
| 47200 | 73 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6550 | inner membrane transporter YedA | |||
| 6560 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoM2798DcmP |
| 6570 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoM2798DcmP |
| 6580 | phosphohydrolase | |||
| 19130 | DNA-binding protein Fis | |||
| 19140 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoM2798ORF19140P |
| 19150 | acrEF/envCD operon transcriptional regulator | |||
| 20260 | ribulose-phosphate 3-epimerase | |||
| 20270 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoM2798DamP |
| 20280 | cell division protein DamX | |||
| 30100 | 141 aa hypothetical protein | |||
| 30110 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoM2798ORF30110P |
| 30120 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoM2798ORF30110P |
| 30130 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoM2798ORF30110P |
| 30140 | mcrBC 5-methylcytosine restriction system | |||
| 40990 | 71 aa hypothetical protein | |||
| 41000 | M | M.KpnYN1ORFGP (89% identity) | M.EcoM2798ORF41000P | |
| 41010 | 118 aa hypothetical protein | |||
| 45430 | 65 aa hypothetical protein | |||
| 45440 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoM2798ORF45440P |
| 45450 | anti-adapter protein IraM | |||
| plasmid pMTY2798_IncN | ||||
| 47430 | IS6 family transposase | |||
| 47440 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoM2798ORF47450P |
| 47450 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoM2798ORF47450P |
| 47460 | 88 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30130 | 579 aa hypothetical protein | |||
| 30140 | R | EcosS9McrCP (100% identity) | EcoM2798McrCP | |
| 30150 | R | EcosS3McrBP (100% identity) | EcoM2798McrBP | |
| 30160 | 84 aa hypothetical protein | |||
| 30850 | DNA methyltransferase | |||
| 30860 | R | Ecou021MrrP (100% identity) | EcoM2798MrrP | |
| 30870 | membrane protein | |||