Escherichia coli EC727A3 |
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Putative Escherichia coli EC727A3 RM systems
Ref: Ni,J. et al. unpublished
REBASE ref # 34909
| Sequence length: | GenBank #: | |
| Chromosome: | 5,177,315 bp | CP100062 |
| plasmid p727A3-135K: | 135,797 bp | CP100064 |
| plasmid p727A3-179K: | 179,278 bp | CP100063 |
| plasmid p727A3-78K: | 78,623 bp | CP100065 |
REBASE acronym: Eco7A3
Org_num: 60394
All begin MZH86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4490 | transposase | |||
| 4495 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco7A3ORF4500P |
| 4500 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco7A3ORF4500P |
| 4505 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco7A3ORF4500P |
| 4510 | AAA family ATPase | |||
| 21360 | adenine/cytosine-specific restriction | |||
| 21365 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco7A3ORF21370P |
| 21370 | M | M.Ecocq9ORF4140P (99% identity) | TGANNNNNNNNTGCT | M.Eco7A3ORF21370P |
| 21375 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco7A3ORF21370P |
| 21380 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2060 | cell division protein DamX | |||
| 2065 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco7A3DamP |
| 2070 | ribulose-phosphate 3-epimerase | |||
| 2685 | DUF2556 family protein | |||
| 2690 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco7A3ORF2690P |
| 2695 | DNA-binding transcriptional regulator Fis | |||
| 6600 | TrmB family transcriptional regulator | |||
| 6605 | M | M.Ecocq9ORF19465P (100% identity) | M.Eco7A3ORF6605P | |
| 6625 | Shiga toxin Stx2e subunit A | |||
| 7185 | Com family DNA-binding transcriptional | |||
| 7190 | M | M.SenYU39ORF1896P (100% identity) | M.Eco7A3ORF7190P | |
| 7195 | ribosome-associated translation inhibitor RaiA | |||
| 10460 | phosphohydrolase | |||
| 10465 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco7A3DcmP |
| 10470 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Eco7A3DcmP |
| 10475 | drug/metabolite exporter YedA | |||
| 12445 | DUF977 family protein | |||
| 12450 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco7A3ORF12450P | |
| 12455 | 139 aa hypothetical protein | |||
| 21095 | BREX-1 system phosphatase PglZ type A | |||
| 21100 | RM | SflLIN6ORF19750P (100% identity) | Eco7A3ORF21100P | |
| 21105 | DUF262 domain-containing protein | |||
| plasmid p727A3-135K | ||||
| 26900 | 73 aa hypothetical protein | |||
| ??? | M | M.Eco2A1ORF28270P (100% identity) | M.Eco7A3ORF26905P | |
| 26910 | reverse transcriptase N-terminal | |||
| plasmid p727A3-179K | ||||
| 25855 | 55 aa hypothetical protein | |||
| 25860 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco7A3ORF25860P |
| 25865 | thermonuclease family protein | |||
| 26195 | DNA-binding protein | |||
| 26200 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Eco7A3ORF26200P |
| 26205 | 284 aa hypothetical protein | |||
| plasmid p727A3-78K | ||||
| 27120 | 97 aa hypothetical protein | |||
| 27125 | M | M.Xca80ORFEP (100% identity) | M.Eco7A3ORF27125P | |
| 27130 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21355 | GTPase | |||
| 21360 | R | Ssp28760MrrP (100% identity) | Eco7A3MrrP | |
| 21365 | type I restriction-modification system | |||
| 21380 | endoribonuclease SymE | |||
| 21385 | R | Ssp28760McrBP (100% identity) | Eco7A3McrBP | |
| 21390 | R | Ssp28760McrCP (100% identity) | Eco7A3McrCP | |