|
Putative Planktothrix agardhii No.365 RM systems
Ref: Blom,J. unpublished
REBASE ref # 11641
Sequence length: | GenBank #: | |
chromosome I: | 4,711,865 bp | LR882944 |
plasmid p1: | 64,491 bp | LR882945 |
plasmid p2: | 39,671 bp | LR882946 |
plasmid p4: | 135,980 bp | LR882948 |
REBASE acronym: Pag365
Org_num: 60219
All begin NO365_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
733 | 490 aa hypothetical protein | |||
734 | M | M.Pru82ORF3352P (99% identity) | M.Pag365ORF734P | |
735 | 78 aa hypothetical protein | |||
736 | YcfA family protein | |||
737 | Antitoxin | |||
738 | protein MJ0435 | |||
739 | UPF0331 protein | |||
740 | 103 aa hypothetical protein | |||
741 | S | S.Pru7821ORF3425P (66% identity) | S.Pag365ORF734P | |
742 | Helix-turn-helix domain protein | |||
743 | 85 aa hypothetical protein | |||
744 | 137 aa hypothetical protein | |||
??? | R | Pru108ORF4713P (98% identity) | Pag365ORF734P | |
747 | 204 aa hypothetical protein | |||
2405 | D-ribulose kinase | |||
2406 | R | PagC7805ORF2055P (98% identity) | Pag365ORF2409P | |
2407 | 80 aa hypothetical protein | |||
2408 | nucleic acid-binding protein, contains | |||
2409 | M | M.Acy7122ORF4817P (76% identity) | M.Pag365ORF2409P | |
2410 | 41 aa hypothetical protein | |||
2548 | Type I site-specific deoxyribonuclease | |||
2549 | S | S.Pag2AORF1514P (93% identity) | S.Pag365ORF2552P | |
2550 | protein HI_1395 | |||
2551 | Genome sequencing data, contig C328 | |||
2552 | M | M.PagC7805ORF2203P (16% identity) | M.Pag365ORF2552AP | |
2553 | M | M.Pag7811ORF1264P (55% identity) | M.Pag365ORF2552BP | |
2554 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
plasmid p1 | ||||
4287 | protein SYNPCC7002_B0001 | |||
4288 | R | PagC7805ORF4369P (100% identity) | Pag365ORF4297P | |
4289 | 69 aa hypothetical protein | |||
4290 | 145 aa hypothetical protein | |||
4291 | S | S.PagC7805ORF4369P (100% identity) | S.Pag365ORF4297P | |
4292 | 44 aa hypothetical protein | |||
4293 | UPF0332 protein | |||
4294 | 121 aa hypothetical protein | |||
4295 | 71 aa hypothetical protein | |||
4296 | Similarity | |||
4297 | M | M.PagC7805ORF4369P (100% identity) | M.Pag365ORF4297P | |
4298 | 72 aa hypothetical protein | |||
plasmid p4 | ||||
4464 | 182 aa hypothetical protein | |||
4465 | R | Csp7425ORF3148P (73% identity) | Pag365ORF4467P | |
4466 | S | S.Ssp7003ORF14610P (48% identity) | S.Pag365ORF4467P | |
4467 | M | M.Pru82ORF5078P (94% identity) | M.Pag365ORF4467P | |
4468 | 70 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
50 | 562 aa hypothetical protein | |||
51 | RM | Pag2AORF287P (99% identity) | Pag365ORF51P | |
52 | Phycobiliprotein ApcE | |||
67 | Ribosome-binding ATPase YchF | |||
68 | M | M.Pag976ORF3209P (100% identity) | M.Pag365ORF68P | |
69 | 34 aa hypothetical protein | |||
102 | Diaminopimelate decarboxylase | |||
103 | M | M.PagC7805ORF4035P (100% identity) | M.Pag365ORF103P | |
104 | 31 aa hypothetical protein | |||
118 | DNA polymerase III subunit alpha | |||
119 | M | M.Pag976ORF3278P (100% identity) | M.Pag365ORF119P | |
120 | R | Pag976ORF3278P (100% identity) | Pag365ORF119P | |
121 | D-alanyl-D-alanine carboxypeptidase DacB | |||
420 | 126 aa hypothetical protein | |||
421 | R | Pag758ORF4193P (42% identity) | Pag365ORF424BP | |
422 | R | PagC7805ORF17P (25% identity) | Pag365ORF424AP | |
423 | 108 aa hypothetical protein | |||
424 | M | M.PagC7805ORF17P (99% identity) | M.Pag365ORF424P | |
425 | 69 aa hypothetical protein | |||
563 | Linearmycin resistance ATP-binding protein LnrL | |||
564 | M | M.PagC7805ORF158P (100% identity) | CCTNAGG | M.Pag365ORF564P |
565 | 95 aa hypothetical protein | |||
605 | ABC transporter ATP-binding protein | |||
606 | M | M.PagC7805ORF200P (100% identity) | CAGCTG | M.Pag365ORF606P |
607 | 293 aa hypothetical protein | |||
762 | tRNA(fMet)-specific endonuclease VapC | |||
763 | M | M.PagC7805ORF365P (90% identity) | M.Pag365ORF763P | |
764 | 149 aa hypothetical protein | |||
765 | R | Pru82ORF5041P (92% identity) | Pag365ORF763P | |
766 | Sulfate adenylyltransferase | |||
826 | Type-2 restriction enzyme BsuBI | |||
827 | M | M.Pag66ORF410P (100% identity) | M.Pag365ORF827P | |
828 | 123 aa hypothetical protein | |||
1013 | 304 aa hypothetical protein | |||
1015 | M | M.PagC7805ORF630P (100% identity) | AGATCT | M.Pag365ORF1015P |
1016 | Ribonuclease D | |||
1104 | Anthranilate phosphoribosyltransferase | |||
1105 | RM | Pag976ORF1530P (100% identity) | Pag365ORF1105P | |
1106 | Sulfite reductase [ferredoxin] | |||
1327 | 743 aa hypothetical protein | |||
1328 | RM | Pag758ORF3132P (83% identity) | Pag365ORF1328P | |
1329 | 29 aa hypothetical protein | |||
1403 | Inorganic triphosphatase | |||
1404 | RM | Pag758ORF3043P (93% identity) | Pag365ORF1404P | |
1405 | CO2 hydration protein | |||
1446 | Dipeptide transport system permease protein | |||
1447 | M | M.Pag976ORF1171P (100% identity) | M.Pag365ORF1447P | |
1448 | Ribonuclease 3 | |||
1474 | 91 aa hypothetical protein | |||
1475 | M | M.Pag66ORF1887P (100% identity) | M.Pag365ORF1475P | |
1476 | 61 aa hypothetical protein | |||
1498 | protein SYNPCC7002_A0175 | |||
1499 | M | M.Pag66ORF1864P (100% identity) | M.Pag365ORF1499P | |
1500 | R | Pag66ORF1864P (99% identity) | Pag365ORF1499P | |
1501 | Similar to tr/P73393/P73393 | |||
1535 | 40 aa hypothetical protein | |||
1536 | M | M.PagC7805ORF1153P (100% identity) | GTCGAC | M.Pag365ORF1536P |
1537 | 230 aa hypothetical protein | |||
1538 | R | PagC7805ORF1153P (100% identity) | GTCGAC | Pag365ORF1536P |
1539 | Ferredoxin-dependent glutamate synthase 2 | |||
1812 | 116 aa hypothetical protein | |||
1813 | RM | Pag976ORF798P (99% identity) | Pag365ORF1813P | |
1814 | 72 aa hypothetical protein | |||
1820 | 103 aa hypothetical protein | |||
1821 | R | PagC7805ORFAP (100% identity) | GCTAGC | Pag365ORF1822P |
1822 | M | M.Pag2AORF2230P (72% identity) | M.Pag365ORF1822P | |
1823 | Ycf55-like protein | |||
1923 | 66 aa hypothetical protein | |||
1924 | RM | Pag66ORF1442P (99% identity) | Pag365ORF1924P | |
1925 | protein HI_1198 | |||
2003 | Oxalate-binding protein | |||
2004 | M | M.EfaTC2ORF8335P (62% identity) | M.Pag365ORF2004P | |
2005 | R | DpsORF2034P (55% identity) | Pag365ORF2004P | |
2006 | Oxalate-binding protein | |||
2076 | 56 aa hypothetical protein | |||
2077 | M | M.Pag976ORF530P (98% identity) | M.Pag365ORF2077P | |
2078 | 189 aa hypothetical protein | |||
2086 | 102 aa hypothetical protein | |||
2087 | RM | Pag976ORF520P (99% identity) | Pag365ORF2087P | |
2088 | GTPase Der | |||
2132 | 155 aa hypothetical protein | |||
2133 | M | M.PagC7805ORF1783P (98% identity) | M.Pag365ORF2133P | |
2134 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
2177 | 95 aa hypothetical protein | |||
2178 | M | M.Pag204ORF17070P (100% identity) | M.Pag365ORF2178P | |
2179 | R | Pru82ORF2026P (100% identity) | TCTAGA | Pag365ORF2178P |
2180 | phosphoenolpyruvate synthase | |||
2237 | tRNA uridine 5-carboxymethylaminomethyl | |||
2238 | M | M.Pag976ORF374P (92% identity) | M.Pag365ORF2238P | |
2239 | 414 aa hypothetical protein | |||
2443 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
2444 | M | M.PagC7805ORF2092P (100% identity) | ATCGAT | M.Pag365ORF2444P |
2445 | R | PagC7805ORF2092P (100% identity) | ATCGAT | Pag365ORF2444P |
2446 | Very-long-chain 3-oxoacyl-CoA reductase | |||
2451 | 81 aa hypothetical protein | |||
2452 | M | M.Pru7821ORF1772P (99% identity) | M.Pag365ORF2452P | |
2453 | Type III restriction protein res subunit | |||
2454 | DNA repair helicase RadD | |||
2455 | M | M.Pru7821ORF1769P (100% identity) | M.Pag365ORF2455P | |
2456 | Peptidase C14, caspase catalytic subunit p20 | |||
2649 | Adenylate cyclase 1 | |||
2650 | RM | Pag1268ORF221P (99% identity) | Pag365ORF2650P | |
2651 | 73 aa hypothetical protein | |||
2694 | Deoxyribose-phosphate aldolase | |||
2695 | M | M.Pag976ORF4258P (96% identity) | M.Pag365ORF2695P | |
2696 | Dihydroorotase | |||
2756 | Undecaprenyl | |||
2758 | M | M.PagC7805ORF2416P (100% identity) | GRCGYC | M.Pag365ORF2758P |
2759 | R | Pag7811ORF1055P (94% identity) | GRCGYC | Pag365ORF2758P |
2760 | 241 aa hypothetical protein | |||
2946 | Prevent-host-death family protein | |||
2947 | RM | Pag976ORF1785P (99% identity) | Pag365ORF2947P | |
2948 | Serine protease Do-like HtrB | |||
2954 | NAD(P) transhydrogenase subunit alpha part 1 | |||
2955 | R | Pag66ORF2521P (99% identity) | Pag365ORF2956P | |
2956 | M | M.Pag204ORF30400P (97% identity) | ATGCAT | M.Pag365ORF2956P |
2957 | Arsenite methyltransferase | |||
2992 | Light-induced protein, chloroplastic | |||
2993 | R | Pru108ORF104P (100% identity) | Pag365ORF2994P | |
2994 | M | M.Pru82ORF3090P (99% identity) | M.Pag365ORF2994P | |
2995 | 226 aa hypothetical protein | |||
3204 | 58 aa hypothetical protein | |||
3205 | M | M.PagC7805ORF2856P (100% identity) | ATTTAAAT | M.Pag365ORF3205P |
3206 | R | PagC7805ORF2856P (100% identity) | ATTTAAAT | Pag365ORF3205P |
3207 | 78 aa hypothetical protein | |||
3217 | Copper-transporting ATPase PAA1, chloroplastic | |||
3218 | R | PagC7805ORF2870P (100% identity) | TCCGGA | Pag365ORF3219P |
3219 | M | M.PagC7805ORF2870P (100% identity) | TCCGGA | M.Pag365ORF3219P |
3220 | Phosphomethylpyrimidine synthase | |||
3290 | PKHD-type hydroxylase tll1907 | |||
3291 | RM | Pag976ORF2131P (99% identity) | Pag365ORF3291P | |
3292 | 123 aa hypothetical protein | |||
3547 | 72 aa hypothetical protein | |||
3548 | M | M.Pag7811ORF3595P (100% identity) | M.Pag365ORF3548P | |
3549 | Adenosylhomocysteinase | |||
3552 | Sugar fermentation stimulation protein homolog | |||
3553 | M | M.Pag976ORF2401P (99% identity) | M.Pag365ORF3553P | |
3554 | 238 aa hypothetical protein | |||
3559 | Na(+)/H(+) antiporter NhaS2 | |||
3560 | RM | Pag1268ORF2631P (99% identity) | Pag365ORF3560P | |
3561 | 154 aa hypothetical protein | |||
3658 | Hybrid signal transduction histidine kinase I | |||
3659 | M | M.Pag976ORF2506P (100% identity) | M.Pag365ORF3659P | |
3660 | 30S ribosomal protein S15 | |||
3850 | 520 aa hypothetical protein | |||
3851 | R | Pag976ORF2732P (100% identity) | Pag365ORF3851P | |
3852 | Sulfate adenylyltransferase subunit 2 | |||
3851 | 322 aa hypothetical protein | |||
3852 | M | M.Pag976DndCP (99% identity) | M.Pag365DndCP | |
3853 | 661 aa hypothetical protein | |||
3852 | Sulfate adenylyltransferase subunit 2 | |||
3853 | M | M.PagC7805DndDP (99% identity) | M.Pag365DndDP | |
3854 | DNA sulfur modification protein DndE | |||
3853 | 661 aa hypothetical protein | |||
3854 | M | M.PagC7805DndEP (100% identity) | M.Pag365DndEP | |
3855 | 175 aa hypothetical protein | |||
4139 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
4140 | R | Pag7811ORF4197P (99% identity) | Pag365ORF4141P | |
4141 | M | M.Pag7811ORF4197P (100% identity) | M.Pag365ORF4141P | |
4142 | Sensor protein kinase WalK | |||
4178 | WD repeat-containing protein alr2800 | |||
4179 | M | M.Pag66ORF3815P (96% identity) | M.Pag365ORF4179P | |
4180 | Antitoxin | |||
plasmid p2 | ||||
4367 | Alkaline phosphatase | |||
4368 | RM | Pag204ORF45620P (72% identity) | Pag365ORF4368P | |
4369 | Twitching motility protein PilT | |||
plasmid p4 | ||||
4418 | RNA polymerase-associated protein RapA | |||
4419 | RM | Pag2AORF4330P (76% identity) | Pag365ORF4419P | |
4420 | 54 aa hypothetical protein | |||
4473 | 66 aa hypothetical protein | |||
4474 | RM | Asp43ORFOP (47% identity) | Pag365ORF4474P | |
4475 | 434 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
1988 | 121 aa hypothetical protein | |||
1990 | M | M.Pru82ORF2226P (80% identity) | M.Pag365ORF1990P | |
1991 | 201 aa hypothetical protein | |||
3333 | Transposase | |||
3334 | R | Pag2AORF3581P (97% identity) | Pag365ORF3335P | |
3335 | M | M.PagC7805ORF2983P (100% identity) | M.Pag365ORF3335P | |
3336 | Ycf54-like protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
1609 | transcription regulator with HTH | |||
1610 | R | Pru7821McrCP (96% identity) | Pag365McrCP | |
1611 | 38 aa hypothetical protein | |||
1612 | R | PagC7805McrBP (98% identity) | Pag365McrBP | |
1613 | 213 aa hypothetical protein | |||
4027 | 306 aa hypothetical protein | |||
4028 | R | Pru108MrrP (99% identity) | Pag365MrrP | |
4029 | SMC protein-like | |||
plasmid p1 | ||||
4318 | 242 aa hypothetical protein | |||
4319 | R | PagC7805GmrSDP (99% identity) | Pag365GmrSDP | |
4320 | transposase for insertion sequence |