|
Putative Planktothrix agardhii No.2A RM systems
Ref: Blom,J. unpublished
REBASE ref # 11641
Sequence length: | GenBank #: | |
chromosome 1: | 4,724,555 bp | LR882938 |
plasmid p2: | 62,266 bp | LR882940 |
REBASE acronym: Pag2A
Org_num: 60218
All begin NO2A_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
1001 | 486 aa hypothetical protein | |||
1002 | M | M.Pag204ORF8260P (100% identity) | M.Pag2AORF1002P | |
1003 | Antitoxin | |||
1004 | protein MJ0435 | |||
1005 | 73 aa hypothetical protein | |||
1006 | 136 aa hypothetical protein | |||
1007 | 66 aa hypothetical protein | |||
1008 | S | S.Pag365ORF734P (57% identity) | S.Pag2AORF1002P | |
1009 | 71 aa hypothetical protein | |||
1010 | 85 aa hypothetical protein | |||
1011 | 137 aa hypothetical protein | |||
1012 | R | Pag66ORF326P (99% identity) | Pag2AORF1002P | |
1013 | 204 aa hypothetical protein | |||
1513 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
1514 | M | M.Pag7811ORF1264P (100% identity) | M.Pag2AORF1514P | |
1515 | Genome sequencing data, contig C328 | |||
1516 | protein HI_1395 | |||
1517 | S | S.Pag365ORF2552P (93% identity) | S.Pag2AORF1514P | |
1518 | Type I site-specific deoxyribonuclease | |||
2502 | Ferredoxin-dependent glutamate synthase 2 | |||
2503 | M | M.MaeKWORF5600P (60% identity) | M.Pag2AORF2503P | |
2504 | 97 aa hypothetical protein | |||
2628 | Glutamine-dependent NAD(+) synthetase | |||
2629 | R | Pag66ORF4464P (95% identity) | Pag2AORF2631P | |
2630 | S | S.Afe6S08ORF13725P (35% identity) | S.Pag2AORF2631P | |
2631 | M | M.Pag66ORF4464P (94% identity) | M.Pag2AORF2631P | |
2632 | protein slr0436 | |||
4101 | 198 aa hypothetical protein | |||
4102 | M | M.Pag7811ORF3893P (85% identity) | M.Pag2AORF4102P | |
4103 | 89 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
113 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
114 | R | Pag7811ORF4197P (100% identity) | Pag2AORF115P | |
115 | M | M.Pag7811ORF4197P (100% identity) | M.Pag2AORF115P | |
116 | Sensor protein kinase WalK | |||
151 | WD repeat-containing protein alr2800 | |||
152 | M | M.Pag365ORF4179P (34% identity) | M.Pag2AORF152AP | |
153 | Transposase | |||
??? | M | M.Pag66ORF3815P (51% identity) | M.Pag2AORF152BP | |
155 | Antitoxin | |||
201 | 133 aa hypothetical protein | |||
202 | C | C.PagC7805ORF3889P (100% identity) | C.Pag2AORF204P | |
203 | R | PagC7805ORF3889P (100% identity) | Pag2AORF204P | |
204 | M | M.PagC7805ORF3889P (100% identity) | M.Pag2AORF204P | |
205 | Ribonuclease J | |||
286 | 562 aa hypothetical protein | |||
287 | RM | Pag365ORF51P (99% identity) | Pag2AORF287P | |
288 | Phycobiliprotein ApcE | |||
301 | Ribosome-binding ATPase YchF | |||
302 | M | M.Pag204ORF1580P (94% identity) | M.Pag2AORF302P | |
303 | R | Pag204ORF1580P (100% identity) | Pag2AORF302P | |
304 | Energy-coupling factor transporter ATP-binding | |||
356 | Diaminopimelate decarboxylase | |||
357 | M | M.Pag7811ORF82P (100% identity) | M.Pag2AORF357P | |
358 | 31 aa hypothetical protein | |||
372 | DNA polymerase III subunit alpha | |||
373 | M | M.Pag976ORF3278P (100% identity) | M.Pag2AORF373P | |
374 | R | Pag7811ORF98P (99% identity) | Pag2AORF373P | |
375 | D-alanyl-D-alanine carboxypeptidase DacB | |||
682 | Transposase | |||
683 | M | M.PagC7805ORF17P (22% identity) | M.Pag2AORF683P | |
684 | 69 aa hypothetical protein | |||
830 | Linearmycin resistance ATP-binding protein LnrL | |||
831 | M | M.Pag7811ORF569P (100% identity) | M.Pag2AORF831P | |
832 | 159 aa hypothetical protein | |||
875 | ABC transporter ATP-binding protein | |||
876 | M | M.PagC7805ORF200P (100% identity) | CAGCTG | M.Pag2AORF876P |
877 | 293 aa hypothetical protein | |||
1087 | Type-2 restriction enzyme BsuBI | |||
1088 | M | M.Pag66ORF410P (100% identity) | M.Pag2AORF1088P | |
1089 | 123 aa hypothetical protein | |||
1312 | 241 aa hypothetical protein | |||
1313 | R | Pag7811ORF1055P (100% identity) | Pag2AORF1314P | |
1314 | M | M.Pag7811ORF1055P (100% identity) | M.Pag2AORF1314P | |
1316 | Undecaprenyl | |||
1374 | Dihydroorotase | |||
1375 | M | M.Pag1268ORF171P (100% identity) | M.Pag2AORF1375P | |
1376 | Deoxyribose-phosphate aldolase | |||
1423 | 40 aa hypothetical protein | |||
1424 | RM | PagC7805ORF2306P (97% identity) | Pag2AORF1424P | |
1425 | Adenylate cyclase 1 | |||
1608 | Peptidase C14, caspase catalytic subunit p20 | |||
1609 | M | M.Pru7821ORF1769P (100% identity) | M.Pag2AORF1609P | |
1610 | 51,5 kDa protein | |||
1610 | 51,5 kDa protein | |||
1611 | M | M.Pag66ORF934P (97% identity) | M.Pag2AORF1611P | |
1612 | 156 aa hypothetical protein | |||
1818 | tRNA modification GTPase MnmE | |||
1819 | M | M.PagC7805ORF1879P (100% identity) | GGATCC | M.Pag2AORF1819P |
1820 | tRNA uridine 5-carboxymethylaminomethyl | |||
1870 | phosphoenolpyruvate synthase | |||
1871 | R | Pag204ORF17070P (100% identity) | Pag2AORF1872P | |
1872 | M | M.Pag7811ORF1632P (99% identity) | M.Pag2AORF1872P | |
1873 | 95 aa hypothetical protein | |||
1917 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
1918 | M | M.Pag7811ORF1679P (100% identity) | M.Pag2AORF1918P | |
1919 | 155 aa hypothetical protein | |||
1965 | GTPase Der | |||
1966 | RM | Pag66ORF1280P (99% identity) | Pag2AORF1966P | |
1967 | 102 aa hypothetical protein | |||
1982 | 189 aa hypothetical protein | |||
1983 | M | M.Pag1268ORF773P (99% identity) | M.Pag2AORF1983P | |
1984 | 56 aa hypothetical protein | |||
2131 | 97 aa hypothetical protein | |||
2132 | RM | Pag204ORF19630P (99% identity) | Pag2AORF2132P | |
2133 | 66 aa hypothetical protein | |||
2229 | Ycf55-like protein | |||
2230 | M | M.Pag204ORF20610P (100% identity) | M.Pag2AORF2230P | |
2231 | R | Pag204ORF20610P (99% identity) | Pag2AORF2230P | |
2232 | 103 aa hypothetical protein | |||
2238 | 74 aa hypothetical protein | |||
2239 | RM | Pag204ORF20700P (98% identity) | Pag2AORF2239P | |
2240 | 116 aa hypothetical protein | |||
2540 | 430 aa hypothetical protein | |||
2541 | R | Pag66ORF1864P (100% identity) | Pag2AORF2542P | |
2542 | M | M.Pag204ORF23740P (100% identity) | M.Pag2AORF2542P | |
2543 | protein SYNPCC7002_A0175 | |||
2564 | 55 aa hypothetical protein | |||
2565 | M | M.Pag66ORF1887P (100% identity) | M.Pag2AORF2565P | |
2566 | 91 aa hypothetical protein | |||
2594 | Phytoene dehydrogenase | |||
2595 | M | M.Pag66ORF1917P (100% identity) | M.Pag2AORF2595P | |
2596 | Dipeptide transport system permease protein | |||
2640 | CO2 hydration protein | |||
2641 | RM | Pag7811ORF2430P (97% identity) | Pag2AORF2641P | |
2642 | tRNA(fMet)-specific endonuclease VapC | |||
2724 | 29 aa hypothetical protein | |||
2725 | RM | Pag204ORF25600P (99% identity) | Pag2AORF2725P | |
2726 | 743 aa hypothetical protein | |||
2803 | 247 aa hypothetical protein | |||
2804 | R | Pag976ORF1392P (100% identity) | Pag2AORF2805P | |
2805 | M | M.Pag976ORF1392P (99% identity) | M.Pag2AORF2805P | |
2806 | Cysteine desulfurase IscS | |||
2947 | Sulfite reductase [ferredoxin] | |||
2948 | RM | Pag204ORF27820P (99% identity) | Pag2AORF2948P | |
2949 | Anthranilate phosphoribosyltransferase | |||
3034 | Ribonuclease D | |||
3035 | M | M.PagC7805ORF630P (100% identity) | AGATCT | M.Pag2AORF3035P |
3037 | 304 aa hypothetical protein | |||
3194 | Prevent-host-death family protein | |||
3195 | RM | Pag66ORF2512P (99% identity) | Pag2AORF3195P | |
3196 | 395 aa hypothetical protein | |||
3203 | NAD(P) transhydrogenase subunit alpha part 1 | |||
3204 | R | Pag66ORF2521P (100% identity) | Pag2AORF3205P | |
3205 | M | M.Pag66ORF2521P (100% identity) | ATGCAT | M.Pag2AORF3205P |
3206 | Methyltransferase type 11 | |||
3232 | Light-induced protein, chloroplastic | |||
3233 | R | Pru108ORF104P (100% identity) | Pag2AORF3234P | |
3234 | M | M.Pag204ORF30800P (55% identity) | M.Pag2AORF3234BP | |
3235 | M | M.Pru82ORF3090P (39% identity) | M.Pag2AORF3234AP | |
3236 | 226 aa hypothetical protein | |||
3432 | ATP-dependent Clp protease adapter protein ClpS | |||
??? | M | M.Pag7811ORF3227P (95% identity) | M.Pag2AORF3433P | |
3435 | R | Pte9214ORF4246P (96% identity) | Pag2AORF3433P | |
3436 | C | C.Pag204ORF32880P (97% identity) | C.Pag2AORF3433P | |
3437 | WD repeat-containing protein alr2800 | |||
3448 | Lipid-A-disaccharide synthase | |||
3449 | M | M.Pag976ORF2046P (100% identity) | M.Pag2AORF3449P | |
3450 | R | Pag976ORF2046P (100% identity) | Pag2AORF3449P | |
??? | C | C.Pag976ORF2046P (100% identity) | C.Pag2AORF3449P | |
3451 | 78 aa hypothetical protein | |||
3532 | PKHD-type hydroxylase tll1907 | |||
3533 | RM | PagC7805ORF2940P (97% identity) | Pag2AORF3533P | |
3534 | 53 aa hypothetical protein | |||
3795 | 72 aa hypothetical protein | |||
3796 | M | M.Pag7811ORF3595P (99% identity) | M.Pag2AORF3796P | |
3797 | Adenosylhomocysteinase | |||
3807 | Na(+)/H(+) antiporter NhaS2 | |||
3808 | RM | Pag1268ORF2631P (99% identity) | Pag2AORF3808P | |
3809 | 154 aa hypothetical protein | |||
4114 | 520 aa hypothetical protein | |||
4115 | R | PagC7805ORF3503P (96% identity) | Pag2AORF4115P | |
4116 | 525 aa hypothetical protein | |||
4115 | HNH endonuclease | |||
4116 | M | M.Pag7811DndCP (100% identity) | M.Pag2ADndCP | |
4117 | 661 aa hypothetical protein | |||
4116 | 525 aa hypothetical protein | |||
4117 | M | M.Pag7811DndDP (100% identity) | M.Pag2ADndDP | |
4118 | DNA sulfur modification protein DndE | |||
4117 | 661 aa hypothetical protein | |||
4118 | M | M.PagC7805DndEP (100% identity) | M.Pag2ADndEP | |
4119 | 175 aa hypothetical protein | |||
plasmid p2 | ||||
4329 | RNA polymerase-associated protein RapA | |||
4330 | RM | Pag66ORF4394P (97% identity) | Pag2AORF4330P | |
4331 | 253 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
2063 | 201 aa hypothetical protein | |||
2064 | M | M.Pag204ORF18990P (100% identity) | M.Pag2AORF2064P | |
2066 | 121 aa hypothetical protein | |||
3579 | 230 aa hypothetical protein | |||
3580 | R | Pag365ORF3335P (97% identity) | Pag2AORF3581P | |
3581 | M | M.PagC7805ORF2983P (100% identity) | M.Pag2AORF3581P | |
3582 | Ycf54-like protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
2446 | 213 aa hypothetical protein | |||
2447 | R | Pag7811McrBP (56% identity) | Pag2AMcrBP | |
2448 | R | Pag7811McrCP (96% identity) | Pag2AMcrCP | |
2449 | transcription regulator with HTH |