Escherichia coli Z0117EC0062 |
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Putative Escherichia coli Z0117EC0062 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 34694
| Sequence length: | GenBank #: | |
| Chromosome: | 5,017,919 bp | CP098197 |
| plasmid pZ0117EC0062-1: | 102,319 bp | CP098198 |
| plasmid pZ0117EC0062-2: | 92,797 bp | CP098199 |
| plasmid pZ0117EC0062-3: | 91,127 bp | CP098200 |
REBASE acronym: Eco0062
Org_num: 59598
All begin NBY21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20405 | adenine/cytosine-specific restriction | |||
| 20410 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco0062ORF20415P |
| 20415 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco0062ORF20415P |
| 20420 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco0062ORF20415P |
| 20425 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2180 | cell division protein DamX | |||
| 2185 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0062DamP |
| 2190 | ribulose-phosphate 3-epimerase | |||
| 2715 | DUF2556 family protein | |||
| 2720 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco0062ORF2720P |
| 2725 | DNA-binding transcriptional regulator Fis | |||
| 10165 | phosphohydrolase | |||
| 10170 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.Eco0062DcmP |
| 10175 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco0062DcmP |
| 10180 | drug/metabolite exporter YedA | |||
| 13705 | 39 aa hypothetical protein | |||
| 13725 | M | M.EcoEC0636ORF17815P (100% identity) | A | M.Eco0062ORF13725P |
| 13730 | TrmB family transcriptional regulator | |||
| plasmid pZ0117EC0062-1 | ||||
| 24150 | 73 aa hypothetical protein | |||
| 24155 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco0062ORF24155P |
| 24160 | 103 aa hypothetical protein | |||
| plasmid pZ0117EC0062-2 | ||||
| 24920 | TerB family tellurite resistance protein | |||
| 24940 | M | M.EcoFu022ORF23585P (100% identity) | M.Eco0062ORF24940P | |
| 24945 | recombination-associated protein RdgC | |||
| plasmid pZ0117EC0062-3 | ||||
| 25150 | 101 aa hypothetical protein | |||
| 25155 | M | M.SflN101ORF24625P (100% identity) | M.Eco0062ORF25155P | |
| 25160 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20400 | GTPase | |||
| 20405 | R | Ssp28760MrrP (100% identity) | Eco0062MrrP | |
| 20410 | type I restriction-modification system | |||
| 20425 | endoribonuclease SymE | |||
| 20430 | R | SenHNK130McrBP (100% identity) | Eco0062McrBP | |
| 20435 | R | SenHNK130McrCP (100% identity) | Eco0062McrCP | |