Escherichia coli Z0117EC0056 |
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Putative Escherichia coli Z0117EC0056 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 34694
Complete sequence: 5,160,718 bp
GenBank #: CP098201
REBASE acronym: Eco0056
Org_num: 59597
All begin NBY20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3600 | endoribonuclease SymE | |||
| 3605 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco0056ORF3615P |
| 3610 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco0056ORF3615P |
| 3615 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.Eco0056ORF3615P |
| 3620 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3825 | PerC family transcriptional regulator | |||
| 3830 | M | M.Ecos67ORF20055P (100% identity) | GATC | M.Eco0056ORF3830P |
| 3835 | LexA family transcriptional regulator | |||
| 5610 | glutamate-5-semialdehyde dehydrogenase | |||
| 5620 | R | Ecos32ORF15460P (100% identity) | GCCGGC | Eco0056ORF5625P |
| 5625 | M | M.Ecos32ORF15460P (100% identity) | GCCGGC | M.Eco0056ORF5625P |
| 5630 | toxin | |||
| 11455 | DUF977 family protein | |||
| 11460 | M | M.EcoS1268ORF11970P (100% identity) | GTCGAC | M.Eco0056ORF11460P |
| 11465 | R | EcosEC21ORF11865P (100% identity) | GTCGAC | Eco0056ORF11460P |
| 11470 | DUF1367 family protein | |||
| 14850 | drug/metabolite exporter YedA | |||
| 14855 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco0056DcmP |
| 14860 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.Eco0056DcmP |
| 14865 | phosphohydrolase | |||
| 22185 | DNA-binding transcriptional regulator Fis | |||
| 22190 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco0056ORF22190P |
| 22195 | DUF2556 family protein | |||
| 22720 | ribulose-phosphate 3-epimerase | |||
| 22725 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0056DamP |
| 22730 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3615 | type I restriction-modification system subunit | |||
| 3620 | R | Ecost88MrrP (100% identity) | Eco0056MrrP | |
| 3625 | 34 aa hypothetical protein | |||