Escherichia coli EC2648-R1-1 |
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Putative Escherichia coli EC2648-R1-1 RM systems
Ref: Qu,H. and Ou,H.-Y. unpublished
REBASE ref # 21278
Complete sequence: 4,601,157 bp
GenBank #: CP084207
REBASE acronym: Eco2648R11
Org_num: 59585
All begin LDB15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 505 | adenine/cytosine-specific restriction | |||
| 510 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco2648R11ORF515P |
| 515 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco2648R11ORF515P |
| 520 | S | S.EcoVir2ORF19035P (100% identity) | AACNNNNNNGTGC | S.Eco2648R11ORF515P |
| 525 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5480 | cell division protein DamX | |||
| 5485 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2648R11DamP |
| 5490 | ribulose-phosphate 3-epimerase | |||
| 6110 | DUF2556 family protein | |||
| 6115 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco2648R11ORF6115P |
| 6120 | DNA-binding transcriptional regulator Fis | |||
| 12605 | phosphohydrolase | |||
| 12610 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2648R11DcmP |
| 12615 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco2648R11DcmP |
| 12620 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 500 | GTPase | |||
| 505 | R | SenHNK130MrrP (100% identity) | Eco2648R11MrrP | |
| 510 | type I restriction-modification system | |||
| 525 | endoribonuclease SymE | |||
| 530 | R | EcoVir2McrBP (100% identity) | Eco2648R11McrBP | |
| 535 | R | SenHNK130McrCP (100% identity) | Eco2648R11McrCP | |
| 540 | 978 aa hypothetical protein | |||
| 16810 | NADP-dependent isocitrate dehydrogenase | |||
| 16815 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco2648R11ORF16815P |
| 16820 | site-specific DNA recombinase | |||