Escherichia coli MEI003 |
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Putative Escherichia coli MEI003 RM systems
Ref: Brilhante,M. et al. unpublished
REBASE ref # 34653
Complete sequence: 5,241,795 bp
GenBank #: CP071263
REBASE acronym: Eco003
Org_num: 59396
All begin J0G23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17605 | endoribonuclease SymE | |||
| 17610 | S | S.EcoEC0001ORF15655P (99% identity) | S.Eco003ORF17615P | |
| 17615 | M | M.SflFF24ORF19705P (100% identity) | M.Eco003ORF17615P | |
| 17620 | R | EcoW102ORF20700P (100% identity) | Eco003ORF17615P | |
| 17625 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4485 | drug/metabolite exporter YedA | |||
| 4490 | V | V.EcoEC0001DcmP (100% identity) | V.Eco003DcmP | |
| 4495 | M | M.EcoEC0001DcmP (100% identity) | CCWGG | M.Eco003DcmP |
| 4500 | phosphohydrolase | |||
| 11780 | DNA-binding transcriptional regulator Fis | |||
| 11785 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco003ORF11785P |
| 11790 | DUF2556 family protein | |||
| 12380 | ribulose-phosphate 3-epimerase | |||
| 12385 | M | M.Fnu048ORFTP (100% identity) | GATC | M.Eco003DamP |
| 12390 | cell division protein DamX | |||
| 21855 | recombination protein NinB | |||
| 21860 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco003ORF21860P |
| 21865 | NinE family protein | |||
| 24035 | 93 aa hypothetical protein | |||
| 24040 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco003ORF24040P |
| 24045 | DUF1317 family protein | |||
| 25030 | TrmB family transcriptional regulator | |||
| 25035 | M | M.EcoLSU61ORF13330P (100% identity) | M.Eco003ORF25035P | |
| 25050 | DUF1737 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17590 | DUF1998 domain-containing protein | |||
| 17595 | R | EcoW102McrC2P (100% identity) | Eco003McrCP | |
| 17600 | R | Ecoc20McrBP (98% identity) | Eco003McrBP | |
| 17605 | endoribonuclease SymE | |||
| 17620 | type I restriction-modification system | |||
| 17625 | R | Ssp28760MrrP (100% identity) | Eco003MrrP | |
| 17630 | GTPase | |||