Neisseria gonorrhoeae CT602 |
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Putative Neisseria gonorrhoeae CT602 RM systems
Ref: Nokchan,N. et al. unpublished
REBASE ref # 34661
Complete sequence: 2,162,702 bp
GenBank #: CP048246
REBASE acronym: NgoCT602
Org_num: 59414
All begin GYN06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3485 | replication-associated recombination protein A | |||
| 3490 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | NgoCT602ORF3515P |
| 3495 | hydroxyacid dehydrogenase | |||
| 3500 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoCT602ORF3515P |
| 3505 | 186 aa hypothetical protein | |||
| 3510 | 279 aa hypothetical protein | |||
| 3515 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoCT602ORF3515P |
| 3520 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoCT602ORF35P |
| 40 | DNA adenine methylase | |||
| 40 | DNA adenine methylase | |||
| ??? | M | M.NgoWPORF8P (100% identity) | GATC | M.NgoCT602ORF45P |
| 55 | 184 aa hypothetical protein | |||
| 1540 | phenylalanine--tRNA ligase subunit alpha | |||
| 1545 | V | V.NgoWSORF391P (100% identity) | V.NgoCT602ORF1550P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.NgoCT602ORF1550P |
| 1560 | R | Npo18661ORFHP (100% identity) | CCGG | NgoCT602ORF1550P |
| 1565 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | SAM-dependent DNA methyltransferase | |||
| 1840 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoCT602ORF1840P |
| 1845 | 140 aa hypothetical protein | |||
| 1865 | uroporphyrinogen decarboxylase | |||
| 1870 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoCT602ORF1880P | |
| 1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoCT602ORF1880P |
| 1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoCT602ORF1880P |
| 1885 | DNA repair protein RadA | |||
| 3375 | 3-isopropylmalate dehydrogenase | |||
| 3380 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoCT602ORF3385P |
| ??? | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoCT602ORF3385P |
| 3395 | 3-isopropylmalate dehydratase small subunit | |||
| 4315 | anthranilate synthase component I | |||
| 4320 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoCT602ORF4320P |
| 4325 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoCT602ORF4320P |
| 4330 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5625 | replication initiation factor | |||
| 5630 | V | V.Ngos1291ORF65P (100% identity) | V.NgoCT602ORF5640P | |
| 5635 | R | Ngos1291ORF65P (100% identity) | CCGG | NgoCT602ORF5640P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.NgoCT602ORF5640P |
| 5650 | type IV pilin protein | |||
| 5825 | excinuclease ABC subunit UvrA | |||
| ??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoCT602ORF5835P |
| 5835 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoCT602ORF5835P |
| 5840 | transposase | |||
| 8990 | FUSC family protein | |||
| 8995 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoCT602ORF9000P |
| 9000 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoCT602ORF9000P |
| 9005 | ribosome recycling factor | |||
| 9510 | 93 aa hypothetical protein | |||
| 9515 | R | Ngo942021ORF9355P (100% identity) | GGTGA | NgoCT602ORF9520P |
| 9520 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoCT602ORF9520P |
| 9525 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoCT602ORF9520P |
| 9530 | RNA-binding transcriptional accessory protein | |||
| 10050 | GTPase ObgE | |||
| 10055 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoCT602ORF10055P |
| 10060 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoCT602ORF10055P |
| 10065 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2750 | peptidyl-prolyl cis-trans isomerase | |||
| 2755 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoCT602ORF2755P |
| 2760 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoCT602ORF2755P |
| 2765 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3200 | alpha-hydroxy-acid oxidizing protein | |||
| 3205 | R | NgoCT530ORF3200P (100% identity) | NgoCT602ORF3210P | |
| ??? | M | M.NgoSH203ORFNP (100% identity) | M.NgoCT602ORF3210P | |
| 3220 | tRNA pseudouridine(55) synthase TruB | |||