Escherichia coli isolate 602 |
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Putative Escherichia coli isolate 602 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
Complete sequence: 4,783,841 bp
GenBank #: OW968111
REBASE acronym: Eco602
Org_num: 58624
All begin AI2860V1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3863 | 322 aa hypothetical protein | |||
| 3864 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco602ORF3865P |
| 3865 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco602ORF3865P |
| 3866 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco602ORF3865P |
| 3867 | Toxic protein SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 337 | Cell division protein DamX | |||
| 338 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco602DamP |
| 339 | Ribulose-phosphate 3-epimerase | |||
| 438 | 59 aa hypothetical protein | |||
| 439 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco602ORF439P |
| 440 | DNA-binding protein Fis | |||
| 765 | 57 aa hypothetical protein | |||
| 766 | M | M.SflFF24DndBP (100% identity) | M.Eco602DndBP | |
| 767 | 544 aa hypothetical protein | |||
| 766 | 361 aa hypothetical protein | |||
| 767 | M | M.SflFF24DndCP (100% identity) | M.Eco602DndCP | |
| 768 | 666 aa hypothetical protein | |||
| 767 | 544 aa hypothetical protein | |||
| 768 | M | M.EcoECJ9DndDP (99% identity) | M.Eco602DndDP | |
| 769 | 118 aa hypothetical protein | |||
| 768 | 666 aa hypothetical protein | |||
| 769 | M | M.SflFF24DndEP (100% identity) | M.Eco602DndEP | |
| 770 | 101 aa hypothetical protein | |||
| 771 | 172 aa hypothetical protein | |||
| 772 | R | EcosEC5DptHP (100% identity) | Eco602DptHP | |
| 773 | 441 aa hypothetical protein | |||
| 772 | 1684 aa hypothetical protein | |||
| 773 | R | SflFF24DptGP (100% identity) | Eco602DptGP | |
| 774 | 549 aa hypothetical protein | |||
| 773 | 441 aa hypothetical protein | |||
| 774 | R | SflFF24DptFP (100% identity) | Eco602DptFP | |
| 775 | Outer membrane protein PagN | |||
| 1782 | 231 aa hypothetical protein | |||
| 1783 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco602DcmP |
| 1784 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco602DcmP |
| 1785 | inner membrane transporter YedA | |||
| 2975 | 71 aa hypothetical protein | |||
| 2976 | M | M.EcofEC1ORF6600P (100% identity) | M.Eco602ORF2976P | |
| 2977 | 64 aa hypothetical protein | |||
| 2983 | 113 aa hypothetical protein | |||
| 2984 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco602ORF2984P |
| 2985 | 146 aa hypothetical protein | |||
| 3511 | 113 aa hypothetical protein | |||
| 3512 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco602ORF3512P |
| 3513 | 146 aa hypothetical protein | |||
| 3530 | 52 aa hypothetical protein | |||
| 3531 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco602ORF3531P |
| 3532 | 71 aa hypothetical protein | |||
| 3911 | 195 aa hypothetical protein | |||
| 3912 | M | M.EcofEC1ORF1985P (100% identity) | RGACAG | M.Eco602ORF3912P |
| 3913 | RNA polymerase-associated protein RapA | |||