Escherichia fergusonii EF21QZZ116 |
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Putative Escherichia fergusonii EF21QZZ116 RM systems
Ref: Guan,C. et al. unpublished
REBASE ref # 34567
| Sequence length: | GenBank #: | |
| Chromosome: | 4,713,494 bp | CP095843 |
| plasmid pQZZ116-tetX-190K: | 190,391 bp | CP095844 |
REBASE acronym: Efe116
Org_num: 58526
All begin MYF53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8770 | GTPase family protein | |||
| 8775 | M | M.Efe65411ORF17490P (100% identity) | M.Efe116ORF8775P | |
| 8780 | S | S.Efe65411ORF17490P (99% identity) | S.Efe116ORF8775P | |
| 8785 | R | EfeC23ORF13600P (100% identity) | Efe116ORF8775P | |
| 8790 | IS1-like element IS1B family transposase | |||
| 10550 | Fic family protein | |||
| 10555 | R | Eco47SOC08ORF2700P (99% identity) | Efe116ORF10560P | |
| 10560 | M | M.EcoLR581ORF37070P (99% identity) | M.Efe116ORF10560P | |
| 10565 | S | S.Hal12sORF5860P (65% identity) | S.Efe116ORF10560P | |
| 10570 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5430 | NinE family protein | |||
| 5435 | M | M.EcoLD391ORF8735P (98% identity) | GATC | M.Efe116ORF5435P |
| 5440 | recombination protein NinB | |||
| 9105 | Arm DNA-binding domain-containing protein | |||
| 9110 | R | SflFF67ORF22305P (99% identity) | GCWGC | Efe116ORF9110P |
| 9115 | helix-turn-helix domain-containing protein | |||
| 11460 | DNA-binding transcriptional regulator Fis | |||
| 11465 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.Efe116ORF11465P |
| 11470 | DUF2556 family protein | |||
| 11985 | ribulose-phosphate 3-epimerase | |||
| 11990 | M | M.EfeTDamP (100% identity) | GATC | M.Efe116DamP |
| 11995 | cell division protein DamX | |||
| 15560 | bifunctional isocitrate dehydrogenase | |||
| 15565 | M | M.EfeTORF2210P (100% identity) | CCWGG | M.Efe116ORF15565P |
| 15570 | glyoxylate bypass operon transcriptional | |||
| 15875 | PerC family transcriptional regulator | |||
| 15880 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Efe116ORF15880P |
| 15885 | LexA family transcriptional regulator | |||
| 20025 | TrmB family transcriptional regulator | |||
| 20030 | M | M.Eco6114ORF13090P (99% identity) | M.Efe116ORF20030P | |
| 20035 | phage lysis protein EssD | |||
| plasmid pQZZ116-tetX-190K | ||||
| 23280 | 56 aa hypothetical protein | |||
| 23285 | M | M.Sen23ORF25130P (100% identity) | CCWGG | M.Efe116ORF23285P |
| 23290 | thermonuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10570 | endoribonuclease SymE | |||
| 10575 | R | EfeTMcrBP (99% identity) | Efe116McrBP | |
| 10580 | R | EfeTMcrCP (98% identity) | Efe116McrCP | |
| 10585 | DUF1998 domain-containing protein | |||